RNA–Protein interactions for RNA: ENST00000360280.7

VPS13A-203, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13A, Length 15,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-203ENST00000360280 ZNF536O15090 1300 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 MEGF11A6BM72 1044 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 ANKRD66B4E2M5 251 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 ADORA3P0DMS8 318 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 WNT4P56705 351 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 IL13RA1P78552 427 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 OR6T1Q8NGN1 323 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 RAB39BQ96DA2 213 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 OR52A5Q9H2C5 316 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 PDZD7Q9H5P4 517 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 GOLGA2P5Q9HBQ8 144 aa8.88□□□□□ -0.99
VPS13A-203ENST00000360280 RPS13P62277 151 aaKnown RBP8.87□□□□□ -0.99
VPS13A-203ENST00000360280 PPP1R8Q12972 351 aaKnown RBP8.87□□□□□ -0.99
VPS13A-203ENST00000360280 LRIT3Q3SXY7 679 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 GDPGP1Q6ZNW5 385 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 ZNF439Q8NDP4 499 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 OR9I1Q8NGQ6 314 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 AGPAT2O15120 278 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 AK1P00568 194 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 HLA-EP13747 358 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 NPBWR1P48145 328 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 AGTRAPQ6RW13 159 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 FOXRED1Q96CU9 486 aaPredicted RBP8.87□□□□□ -0.99
VPS13A-203ENST00000360280 GPR88Q9GZN0 384 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 RHCGQ9UBD6 479 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 KNG1P01042 644 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 CSKP41240 450 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 STC1P52823 247 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 HSD17B7P56937 341 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 NPAS4Q8IUM7 802 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 ZNF100Q8IYN0 542 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 C17orf112F2Z3M2 114 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 ALDOBP05062 364 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 LYSMD3Q7Z3D4 306 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 ZNF610Q8N9Z0 462 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 ZNF461Q8TAF7 563 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 ELP4Q96EB1 424 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 UHRF2Q96PU4 802 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 EBF1Q9UH73 591 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 ADH1BP00325 375 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 PYCR1P32322 319 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 DGKEP52429 567 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 PRPS1P60891 318 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 EEF1AKMT2Q5JPI9 291 aaKnown RBP8.87□□□□□ -0.99
VPS13A-203ENST00000360280 VARS2Q5ST30 1063 aaKnown RBP8.87□□□□□ -0.99
VPS13A-203ENST00000360280 FAM205BPQ63HN1 556 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 SH3YL1Q96HL8 342 aaPredicted RBP8.87□□□□□ -0.99
VPS13A-203ENST00000360280 NCDNQ9UBB6 729 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 TMEM63AO94886 807 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 HYAL2Q12891 473 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 DUSP28Q4G0W2 176 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 DPPA2Q7Z7J5 298 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 SLC1A7O00341 560 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 VEGFAP15692 232 aaPredicted RBP8.87□□□□□ -0.99
VPS13A-203ENST00000360280 DRD5P21918 477 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 HRH2P25021 359 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 ZNF425Q6IV72 752 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 OR51T1Q8NGJ9 327 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 WDR20Q8TBZ3 569 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 CDKN2AIPNLQ96HQ2 116 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 SLC6A17Q9H1V8 727 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 TXNL4BQ9NX01 149 aaKnown RBP8.87□□□□□ -0.99
VPS13A-203ENST00000360280 OR12D1P0DN82 309 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 SDSLQ96GA7 329 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 NICN1Q9BSH3 213 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 HAO2Q9NYQ3 351 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 DLGAP4Q9Y2H0 992 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 A0A1W2PPV4 95 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 A8MUA0 341 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 MAGEB4O15481 346 aaPredicted RBP8.87□□□□□ -0.99
VPS13A-203ENST00000360280 PGCP20142 388 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 CA5AP35218 305 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 ZFAND1Q8TCF1 268 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 OR5P2Q8WZ92 322 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 MFFQ9GZY8 342 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 B4GALT2O60909 372 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 SELPP16109 830 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 CPT2P23786 658 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 ZNF705AQ6ZN79 300 aaPredicted RBP8.87□□□□□ -0.99
VPS13A-203ENST00000360280 OR9A1PQ8NGU1 263 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 SORCS1Q8WY21 1168 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 RGPD1P0DJD0 1748 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 C1orf167Q5SNV9 1468 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 ARVCFO00192 962 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 RAB3DO95716 219 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 CLIC3O95833 236 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 STT3AP46977 705 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 CASP6P55212 293 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 EIF4HQ15056 248 aaKnown RBP8.87□□□□□ -0.99
VPS13A-203ENST00000360280 PLEKHS1Q5SXH7 462 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 NUP43Q8NFH3 380 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 SGCZQ96LD1 299 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 OR1F2PQ96R84 312 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 PSD2Q9BQI7 771 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 SLC2A11Q9BYW1 496 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 PTTG3PQ9NZH4 202 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 PHRF1Q9P1Y6 1649 aaKnown RBP8.87□□□□□ -0.99
VPS13A-203ENST00000360280 A6NHS1 94 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 EOMESO95936 686 aa8.87□□□□□ -0.99
VPS13A-203ENST00000360280 HLA-AP01891 365 aaKnown RBP8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms