RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 SLC18B1Q6NT16 456 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 TMEM150AQ86TG1 271 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 ARL11Q969Q4 196 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 ACSL5Q9ULC5 683 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 NAALAD2Q9Y3Q0 740 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 SCAMP2O15127 329 aaKnown RBP15.27■□□□□ 0.04
COL18A1-203ENST00000359759 SLC22A5O76082 557 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 C1orf61Q13536 156 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 ELOAQ14241 798 aaKnown RBP15.27■□□□□ 0.04
COL18A1-203ENST00000359759 SERPINA12Q8IW75 414 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 CREB3L4Q8TEY5 395 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 SMOQ99835 787 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 TCRBV21S2A2A0A5A6 115 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 FAM72CH0Y354 149 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 DNAJB1P25685 340 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 CHATP28329 748 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 SHMT2P34897 504 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 FAM72AQ5TYM5 149 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 DESI1Q6ICB0 168 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 FAM72DQ6L9T8 149 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 ARHGAP11AQ6P4F7 1023 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 FAM72BQ86X60 149 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 OR10T2Q8NGX3 314 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 SIGLEC10Q96LC7 697 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 VRK1Q99986 396 aaPredicted RBP15.27■□□□□ 0.04
COL18A1-203ENST00000359759 SEZ6LQ9BYH1 1024 aa15.27■□□□□ 0.04
COL18A1-203ENST00000359759 TYROBPO43914 113 aa15.27■□□□□ 0.03
COL18A1-203ENST00000359759 SGSHP51688 502 aa15.27■□□□□ 0.03
COL18A1-203ENST00000359759 RNF4P78317 190 aa15.27■□□□□ 0.03
COL18A1-203ENST00000359759 INAVAQ3KP66 663 aa15.27■□□□□ 0.03
COL18A1-203ENST00000359759 BCO2Q9BYV7 579 aa15.27■□□□□ 0.03
COL18A1-203ENST00000359759 SLC25A18Q9H1K4 315 aa15.27■□□□□ 0.03
COL18A1-203ENST00000359759 CD300AQ9UGN4 299 aa15.27■□□□□ 0.03
COL18A1-203ENST00000359759 FAM221BA6H8Z2 402 aa15.27■□□□□ 0.03
COL18A1-203ENST00000359759 MC2RQ01718 297 aa15.27■□□□□ 0.03
COL18A1-203ENST00000359759 OR4D1Q15615 310 aa15.27■□□□□ 0.03
COL18A1-203ENST00000359759 FAM83FQ8NEG4 500 aaPredicted RBP15.27■□□□□ 0.03
COL18A1-203ENST00000359759 TMEM185AQ8NFB2 350 aa15.27■□□□□ 0.03
COL18A1-203ENST00000359759 OR8K5Q8NH50 307 aa15.27■□□□□ 0.03
COL18A1-203ENST00000359759 SLA2Q9H6Q3 261 aa15.27■□□□□ 0.03
COL18A1-203ENST00000359759 MST1RQ04912 1400 aa15.27■□□□□ 0.03
COL18A1-203ENST00000359759 OXSR1O95747 527 aaPredicted RBP15.27■□□□□ 0.03
COL18A1-203ENST00000359759 C6P13671 934 aa15.27■□□□□ 0.03
COL18A1-203ENST00000359759 TP53I3Q53FA7 332 aa15.27■□□□□ 0.03
COL18A1-203ENST00000359759 ZNF542PQ5EBM4 170 aa15.27■□□□□ 0.03
COL18A1-203ENST00000359759 OR4C11Q6IEV9 310 aa15.27■□□□□ 0.03
COL18A1-203ENST00000359759 GPR137CQ8N3F9 429 aa15.27■□□□□ 0.03
COL18A1-203ENST00000359759 ACBD7Q8N6N7 88 aa15.27■□□□□ 0.03
COL18A1-203ENST00000359759 OR13J1Q8NGT2 312 aa15.27■□□□□ 0.03
COL18A1-203ENST00000359759 C16orf78Q8WTQ4 265 aa15.27■□□□□ 0.03
COL18A1-203ENST00000359759 AK6Q9Y3D8 172 aaKnown RBP15.27■□□□□ 0.03
COL18A1-203ENST00000359759 SOBPA7XYQ1 873 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 LYRM1O43325 122 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 ADH1BP00325 375 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 PORP16435 677 aaPredicted RBP15.26■□□□□ 0.03
COL18A1-203ENST00000359759 CNR2P34972 360 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 MTNR1AP48039 350 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 GSCP56915 257 aaPredicted RBP15.26■□□□□ 0.03
COL18A1-203ENST00000359759 CDK3Q00526 305 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 SLC35F2Q8IXU6 374 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 OR1S1Q8NH92 325 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 PCDHGA2Q9Y5H1 932 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 PRKYO43930 277 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 MAOAP21397 527 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 KDELR2P33947 212 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 FKBP1BP68106 108 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 FAM83HQ6ZRV2 1179 aaPredicted RBP15.26■□□□□ 0.03
COL18A1-203ENST00000359759 OR9Q2Q8NGE9 314 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.26■□□□□ 0.03
COL18A1-203ENST00000359759 B3GNT2Q9NY97 397 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 TMEM59LQ9UK28 342 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 STMND1H3BQB6 276 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 FAM189BP81408 668 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 LY6G5CQ5SRR4 150 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 SYT14Q8NB59 555 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 TSACCQ96A04 125 aaPredicted RBP15.26■□□□□ 0.03
COL18A1-203ENST00000359759 TMIGD2Q96BF3 282 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 FEVQ99581 238 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 SCGB2A1O75556 95 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 OPRL1P41146 370 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 ZDHHC14Q8IZN3 488 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 KCNJ9Q92806 393 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 CIDECQ96AQ7 238 aaPredicted RBP15.26■□□□□ 0.03
COL18A1-203ENST00000359759 ZNF559Q9BR84 538 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 INPP5KQ9BT40 448 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 GPR88Q9GZN0 384 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 POPDC3Q9HBV1 291 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 PIP5K1CO60331 668 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 ACTL6BO94805 426 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 CD79BP40259 229 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 NFATC3Q12968 1075 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 EIF2B1Q14232 305 aaKnown RBP15.26■□□□□ 0.03
COL18A1-203ENST00000359759 TMEM35AQ53FP2 167 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 C6orf89Q6UWU4 347 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 IL17RCQ8NAC3 791 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 NETO1Q8TDF5 533 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 DENND1AQ8TEH3 1009 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 KLHDC7BQ96G42 594 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 SLC41A3Q96GZ6 507 aa15.26■□□□□ 0.03
COL18A1-203ENST00000359759 SAMD8Q96LT4 415 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms