RNA–Protein interactions for RNA: ENST00000358901.10

VCP-201, Transcript of valosin containing protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCP, Length 4,370 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-201ENST00000358901 CTDSP2O14595 271 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 GNSP15586 552 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 SLC5A12Q1EHB4 618 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 SYNPOQ8N3V7 929 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 LSM14AQ8ND56 463 aaKnown RBP13.02□□□□□ -0.32
VCP-201ENST00000358901 OR6N1Q8NGY5 312 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 TESCQ96BS2 214 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 SLC6A16Q9GZN6 736 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 FOLH1BQ9HBA9 442 aa13.02□□□□□ -0.32
VCP-201ENST00000358901 TEX46H3BTG2 121 aa13.02□□□□□ -0.33
VCP-201ENST00000358901 MEN1O00255 615 aa13.02□□□□□ -0.33
VCP-201ENST00000358901 NARSO43776 548 aaKnown RBP13.02□□□□□ -0.33
VCP-201ENST00000358901 HMGN2P05204 90 aaKnown RBP13.02□□□□□ -0.33
VCP-201ENST00000358901 HCKP08631 526 aa13.02□□□□□ -0.33
VCP-201ENST00000358901 S1PR1P21453 382 aa13.02□□□□□ -0.33
VCP-201ENST00000358901 COQ8AQ8NI60 647 aa13.02□□□□□ -0.33
VCP-201ENST00000358901 RAD9AQ99638 391 aa13.02□□□□□ -0.33
VCP-201ENST00000358901 RANBP3Q9H6Z4 567 aaPredicted RBP13.02□□□□□ -0.33
VCP-201ENST00000358901 CXXC1Q9P0U4 656 aaPredicted RBP13.02□□□□□ -0.33
VCP-201ENST00000358901 PPM1BO75688 479 aa13.02□□□□□ -0.33
VCP-201ENST00000358901 PRLP01236 227 aa13.02□□□□□ -0.33
VCP-201ENST00000358901 CSTBP04080 98 aaKnown RBP13.02□□□□□ -0.33
VCP-201ENST00000358901 HBA1P69905 142 aa13.02□□□□□ -0.33
VCP-201ENST00000358901 APOFQ13790 326 aa13.02□□□□□ -0.33
VCP-201ENST00000358901 SLC9B2Q86UD5 537 aa13.02□□□□□ -0.33
VCP-201ENST00000358901 LMNTD1Q8N9Z9 388 aa13.02□□□□□ -0.33
VCP-201ENST00000358901 OR6Q1Q8NGQ2 317 aa13.02□□□□□ -0.33
VCP-201ENST00000358901 ZNF480Q8WV37 535 aa13.02□□□□□ -0.33
VCP-201ENST00000358901 MYLIPQ8WY64 445 aa13.02□□□□□ -0.33
VCP-201ENST00000358901 ACOT12Q8WYK0 555 aa13.02□□□□□ -0.33
VCP-201ENST00000358901 SGTBQ96EQ0 304 aa13.02□□□□□ -0.33
VCP-201ENST00000358901 HIST1H2AAQ96QV6 131 aa13.02□□□□□ -0.33
VCP-201ENST00000358901 FAM83CQ9BQN1 747 aa13.02□□□□□ -0.33
VCP-201ENST00000358901 DPCDQ9BVM2 203 aaPredicted RBP13.02□□□□□ -0.33
VCP-201ENST00000358901 CD93Q9NPY3 652 aa13.02□□□□□ -0.33
VCP-201ENST00000358901 RGS9O75916 674 aaPredicted RBP13.01□□□□□ -0.33
VCP-201ENST00000358901 IFNA21P01568 189 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 RAB3BP20337 219 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 AOAHP28039 575 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 DPP6P42658 865 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 OC90Q02509 493 aaPredicted RBP13.01□□□□□ -0.33
VCP-201ENST00000358901 ZNF542PQ5EBM4 170 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 ALG10BQ5I7T1 473 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 UBE2UQ5VVX9 321 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 ALG1LQ6GMV1 187 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 KCTD18Q6PI47 426 aaPredicted RBP13.01□□□□□ -0.33
VCP-201ENST00000358901 NAXEQ8NCW5 288 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 LMX1AQ8TE12 382 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 ISL2Q96A47 359 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 MS4A4AQ96JQ5 239 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 HS6ST2Q96MM7 605 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 MROQ9BYG7 248 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 PPIL3Q9H2H8 161 aaKnown RBP13.01□□□□□ -0.33
VCP-201ENST00000358901 MTHFD2LQ9H903 347 aaPredicted RBP13.01□□□□□ -0.33
VCP-201ENST00000358901 GPN2Q9H9Y4 310 aaPredicted RBP13.01□□□□□ -0.33
VCP-201ENST00000358901 ALKBH4Q9NXW9 302 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 GSKIPQ9P0R6 139 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 ANKMY1Q9P2S6 941 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 MGAT4CQ9UBM8 478 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 PRODH2Q9UF12 536 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 TAF1P21675 1872 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 NUP205Q92621 2012 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 LYRM1O43325 122 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 ADORA3P0DMS8 318 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 HTR2BP41595 481 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 S100A10P60903 97 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 BCL2L15Q5TBC7 163 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 GLT8D1Q68CQ7 371 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 CNIH2Q6PI25 160 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 VWA5B2Q8N398 1253 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 CSNK1A1LQ8N752 337 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 FAM86B1Q8N7N1 296 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 ANKLE1Q8NAG6 615 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 RHOXF1Q8NHV9 184 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 KLHDC7BQ96G42 594 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 MSLNLQ96KJ4 702 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 MACROD1Q9BQ69 325 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 ARL6Q9H0F7 186 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 A0A1B0GVI7 797 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 OR52A4PA6NMU1 304 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 RNGTTO60942 597 aaKnown RBP13.01□□□□□ -0.33
VCP-201ENST00000358901 ITGAMP11215 1152 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 DDCP20711 480 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 HOXC5Q00444 222 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 TUBB3Q13509 450 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 METTL25Q8N6Q8 603 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 OR6C4Q8NGE1 309 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 OR2L8Q8NGY9 312 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 SLC41A3Q96GZ6 507 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 CPPED1Q9BRF8 314 aaPredicted RBP13.01□□□□□ -0.33
VCP-201ENST00000358901 HCFC1R1Q9NWW0 138 aa13.01□□□□□ -0.33
VCP-201ENST00000358901 TRAPPC13A5PLN9 417 aa13□□□□□ -0.33
VCP-201ENST00000358901 SLC10A3P09131 477 aa13□□□□□ -0.33
VCP-201ENST00000358901 LHCGRP22888 699 aa13□□□□□ -0.33
VCP-201ENST00000358901 MC3RP41968 323 aa13□□□□□ -0.33
VCP-201ENST00000358901 CST6Q15828 149 aa13□□□□□ -0.33
VCP-201ENST00000358901 LRFN4Q6PJG9 635 aa13□□□□□ -0.33
VCP-201ENST00000358901 PELI3Q8N2H9 469 aa13□□□□□ -0.33
VCP-201ENST00000358901 DEFB119Q8N690 84 aa13□□□□□ -0.33
VCP-201ENST00000358901 SYT14Q8NB59 555 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms