RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 DOLKQ9UPQ8 538 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 ASB4Q9Y574 426 aa13.45□□□□□ -0.26
NIPAL3-203ENST00000358028 CACNA1EQ15878 2313 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 PRSS38A1L453 326 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 PRAMEF27A3QJZ7 478 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 AGAP5A6NIR3 686 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 ZSCAN9O15535 394 aaPredicted RBP13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 GUCY1B2O75343 617 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 PRKRAO75569 313 aaKnown RBP13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 UPK1BO75841 260 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 SLITRK5O94991 958 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 PTHP01270 115 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 GASTP01350 101 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 HIST1H1TP22492 207 aaPredicted RBP13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 ATP5A1P25705 553 aaKnown RBP13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 MAOBP27338 520 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 MPLP40238 635 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 SLC15A1P46059 708 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 ID4P47928 161 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 KHKP50053 298 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 NUDT6P53370 316 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 KIAA1024LP59773 190 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 SPEM2Q0P670 501 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 CDC20Q12834 499 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 ILKQ13418 452 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 SYPL1Q16563 259 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 PLAG1Q6DJT9 500 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 MRM1Q6IN84 353 aaKnown RBP13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 PTCHD4Q6ZW05 846 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 SZRD1Q7Z422 152 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 CADM4Q8NFZ8 388 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 OR2L5Q8NG80 312 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 SFXN5Q8TD22 340 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 JPH3Q8WXH2 748 aaPredicted RBP13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 ASB12Q8WXK4 309 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 ZBTB20Q9HC78 741 aaPredicted RBP13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 AMBNQ9NP70 447 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 ZCCHC3Q9NUD5 404 aaKnown RBP13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 TRPC4Q9UBN4 977 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 ACAD8Q9UKU7 415 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 IFT52Q9Y366 437 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 GPC6Q9Y625 555 aaPredicted RBP13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 COLEC10Q9Y6Z7 277 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 PCDH15Q96QU1 1955 aa13.44□□□□□ -0.26
NIPAL3-203ENST00000358028 TRBV4-1A0A0J9YWV2 114 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 A0A1W2PR48 441 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 METTL12A8MUP2 240 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 IGHV4-34P06331 123 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 H1F0P07305 194 aaKnown RBP13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 HOXC4P09017 264 aaPredicted RBP13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 SLX4IPQ5VYV7 408 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 ZNF425Q6IV72 752 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 TMEM64Q6YI46 380 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 LINC00471Q8N535 108 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 ACOT4Q8N9L9 421 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 OR5D16Q8NGK9 328 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 VANGL1Q8TAA9 524 aaPredicted RBP13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 PIGKQ92643 395 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 SLC25A19Q9HC21 320 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 CPNE5Q9HCH3 593 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 PARD6AQ9NPB6 346 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 SEMA3GQ9NS98 782 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 REV1Q9UBZ9 1251 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 SEC14L3Q9UDX4 400 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 MKLN1Q9UL63 735 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 SNX7Q9UNH6 387 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 PCDHGA4Q9Y5G9 962 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 PEX16Q9Y5Y5 336 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 SLCO1B1Q9Y6L6 691 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 LRRC72A6NJI9 287 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 GLOD5A6NK44 160 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 WASHC1A8K0Z3 465 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 ISM1B1AKI9 464 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 C10orf142B7Z368 130 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 FAM227AF5H4B4 570 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 TLR4O00206 839 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 ERAL1O75616 437 aaKnown RBP13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 AIFM1O95831 613 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 CHRM5P08912 532 aaPredicted RBP13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 NR2F1P10589 423 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 ELAVL4P26378 380 aaKnown RBP13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 PPP2R1BP30154 601 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 S100A5P33763 92 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 ANXA11P50995 505 aaKnown RBP13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 UGT2B15P54855 530 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 RHAGQ02094 409 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 ALDH6A1Q02252 535 aaKnown RBP13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 FOXD4Q12950 439 aaPredicted RBP13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 CBX3Q13185 183 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 DCST1Q5T197 706 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 RNLSQ5VYX0 342 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 KIAA0895LQ68EN5 471 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 C12orf73Q69YU5 71 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 TCTN3Q6NUS6 607 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 WASH2PQ6VEQ5 465 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 DEF8Q6ZN54 512 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 KRT73Q86Y46 540 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 SRFBP1Q8NEF9 429 aaKnown RBP13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 OR4D11Q8NGI4 311 aa13.43□□□□□ -0.26
NIPAL3-203ENST00000358028 BBS10Q8TAM1 723 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms