RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 HYAL2Q12891 473 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 LRP8Q14114 963 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 LRIT3Q3SXY7 679 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 C22orf42Q6IC83 251 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 LHFPL3Q86UP9 236 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 PLXDC1Q8IUK5 500 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 ACVR1CQ8NER5 493 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 IL17FQ96PD4 163 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 ZNF300Q96RE9 604 aaPredicted RBP11.16□□□□□ -0.62
COL9A1-202ENST00000357250 DPH2Q9BQC3 489 aaPredicted RBP11.16□□□□□ -0.62
COL9A1-202ENST00000357250 PPP4R1LQ9P1A2 415 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 UBQLN2Q9UHD9 624 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 TCRBV3S1A0A5B6 114 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 ZNF860A6NHJ4 632 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 CENPBD1B2RD01 187 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 CREBL2O60519 120 aaPredicted RBP11.16□□□□□ -0.62
COL9A1-202ENST00000357250 ADORA3P0DMS8 318 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 DDCP20711 480 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 IL4RP24394 825 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 ZNF81P51508 661 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 C3P1Q6ZMU1 363 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 SHFQ7M4L6 423 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 FOXJ1Q92949 421 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 DHRS1Q96LJ7 313 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 SOX17Q9H6I2 414 aaPredicted RBP11.16□□□□□ -0.62
COL9A1-202ENST00000357250 NHSQ6T4R5 1651 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 EVPLQ92817 2033 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 C13orf42A0A1B0GVH6 325 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 TGM5O43548 720 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 DNASE1P24855 282 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 SLC6A8P48029 635 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 SOX2P48431 317 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 ART1P52961 327 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 NDUFAF5Q5TEU4 345 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 HTR3DQ70Z44 454 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 ADGRG5Q8IZF4 528 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 CLECL1Q8IZS7 167 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 APIPQ96GX9 242 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 PRR11Q96HE9 360 aaPredicted RBP11.16□□□□□ -0.62
COL9A1-202ENST00000357250 AGPAT4Q9NRZ5 378 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 CNOT2Q9NZN8 540 aaKnown RBP11.16□□□□□ -0.62
COL9A1-202ENST00000357250 APOBEC3BQ9UH17 382 aaKnown RBP11.16□□□□□ -0.62
COL9A1-202ENST00000357250 PCDHA9Q9Y5H5 950 aa11.16□□□□□ -0.62
COL9A1-202ENST00000357250 ADAMTS7Q9UKP4 1686 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 VSTM2BA6NLU5 285 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 EEF1E1O43324 174 aaKnown RBP11.15□□□□□ -0.62
COL9A1-202ENST00000357250 NDUFB2O95178 105 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 CSF2P04141 144 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 PRSS56P0CW18 603 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 RAB3BP20337 219 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 FUT4P22083 530 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 MRPS10P82664 201 aaKnown RBP11.15□□□□□ -0.62
COL9A1-202ENST00000357250 TMPRSS12Q86WS5 348 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 KLBQ86Z14 1044 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 ADAMTS16Q8TE57 1224 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 ZFYVE21Q9BQ24 234 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 CLEC4EQ9ULY5 219 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 BLACEA4D250 179 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 NAP1L6A6NFF2 107 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 A8MU76 341 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 TRAPPC6AO75865 159 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 OR2B3O76000 313 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 MRPL3P09001 348 aaKnown RBP11.15□□□□□ -0.62
COL9A1-202ENST00000357250 CD3GP09693 182 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 PNMTP11086 282 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 WNT4P56705 351 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 MS4A2Q01362 244 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 KIR2DS3Q14952 304 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 CDK10Q15131 360 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 RHEBQ15382 184 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 CHRFAM7AQ494W8 412 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 PDZD3Q86UT5 571 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 DRAXINQ8NBI3 349 aaPredicted RBP11.15□□□□□ -0.62
COL9A1-202ENST00000357250 OR8K5Q8NH50 307 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 SORCS1Q8WY21 1168 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 NINJ1Q92982 152 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 FAM46BQ96A09 425 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 SLC41A3Q96GZ6 507 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 HYLS1Q96M11 299 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 KLF16Q9BXK1 252 aaPredicted RBP11.15□□□□□ -0.62
COL9A1-202ENST00000357250 SLC6A16Q9GZN6 736 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 GMEB2Q9UKD1 530 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 GPR45Q9Y5Y3 372 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 SCN7AQ01118 1682 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 A0A1W2PPL8 197 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 TCRBV21S2A2A0A5A6 115 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 ITGAMP11215 1152 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 JUNDP17535 347 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 CNR2P34972 360 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 NKX3-2P78367 333 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 CDK5R2Q13319 367 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 BTBD16Q32M84 506 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 ALG10BQ5I7T1 473 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 SLC18B1Q6NT16 456 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 TSPAN33Q86UF1 283 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 TMEM173Q86WV6 379 aaPredicted RBP11.15□□□□□ -0.62
COL9A1-202ENST00000357250 SFXN5Q8TD22 340 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 TFAP2CQ92754 450 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 BOCQ9BWV1 1114 aa11.15□□□□□ -0.62
COL9A1-202ENST00000357250 OR10A4Q9H209 315 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms