RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 MIPOL1Q8TD10 442 aa14.8□□□□□ -0.04
FDPS-201ENST00000356657 NUDT8Q8WV74 236 aa14.8□□□□□ -0.04
FDPS-201ENST00000356657 SLC39A7Q92504 469 aa14.8□□□□□ -0.04
FDPS-201ENST00000356657 GTF2H4Q92759 462 aa14.8□□□□□ -0.04
FDPS-201ENST00000356657 VPS33AQ96AX1 596 aa14.8□□□□□ -0.04
FDPS-201ENST00000356657 NEURL3Q96EH8 262 aa14.8□□□□□ -0.04
FDPS-201ENST00000356657 SGCZQ96LD1 299 aa14.8□□□□□ -0.04
FDPS-201ENST00000356657 BBC3Q96PG8 261 aaPredicted RBP14.8□□□□□ -0.04
FDPS-201ENST00000356657 LRRC37BQ96QE4 947 aa14.8□□□□□ -0.04
FDPS-201ENST00000356657 RASL10BQ96S79 203 aa14.8□□□□□ -0.04
FDPS-201ENST00000356657 STACQ99469 402 aa14.8□□□□□ -0.04
FDPS-201ENST00000356657 ITPAQ9BY32 194 aa14.8□□□□□ -0.04
FDPS-201ENST00000356657 Q9N2J8 555 aa14.8□□□□□ -0.04
FDPS-201ENST00000356657 SLC52A3Q9NQ40 469 aa14.8□□□□□ -0.04
FDPS-201ENST00000356657 DUSP22Q9NRW4 184 aa14.8□□□□□ -0.04
FDPS-201ENST00000356657 PCDHGB6Q9Y5F9 930 aa14.8□□□□□ -0.04
FDPS-201ENST00000356657 ZFYVE26Q68DK2 2539 aa14.8□□□□□ -0.04
FDPS-201ENST00000356657 IGSF10Q6WRI0 2623 aa14.8□□□□□ -0.04
FDPS-201ENST00000356657 TNRC6AQ8NDV7 1962 aaKnown RBP14.79□□□□□ -0.04
FDPS-201ENST00000356657 EXPH5Q8NEV8 1989 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 OR5H15A6NDH6 313 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 NDUFAB1O14561 156 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 ASNA1O43681 348 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 ABCB7O75027 752 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 OR2J2O76002 312 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 KCNH1O95259 989 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 ANP32DO95626 131 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 CPSF4O95639 269 aaKnown RBP14.79□□□□□ -0.04
FDPS-201ENST00000356657 HMGN2P05204 90 aaKnown RBP14.79□□□□□ -0.04
FDPS-201ENST00000356657 CAPN3P20807 821 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 EFNA1P20827 205 aaPredicted RBP14.79□□□□□ -0.04
FDPS-201ENST00000356657 PPIBP23284 216 aaKnown RBP14.79□□□□□ -0.04
FDPS-201ENST00000356657 PTGER1P34995 402 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 HLCSP50747 726 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 PSMD4P55036 377 aaKnown RBP14.79□□□□□ -0.04
FDPS-201ENST00000356657 MRPS22P82650 360 aaKnown RBP14.79□□□□□ -0.04
FDPS-201ENST00000356657 RAPSNQ13702 412 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 UBAP2LQ14157 1087 aaKnown RBP14.79□□□□□ -0.04
FDPS-201ENST00000356657 TLR1Q15399 786 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 LRIF1Q5T3J3 769 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 B3GNTL1Q67FW5 361 aaPredicted RBP14.79□□□□□ -0.04
FDPS-201ENST00000356657 MTDHQ86UE4 582 aaKnown RBP14.79□□□□□ -0.04
FDPS-201ENST00000356657 BEST3Q8N1M1 668 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 GOLM1Q8NBJ4 401 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 CCDC197Q8NCU1 140 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 RP9Q8TA86 221 aaKnown RBP14.79□□□□□ -0.04
FDPS-201ENST00000356657 THAP3Q8WTV1 239 aaPredicted RBP14.79□□□□□ -0.04
FDPS-201ENST00000356657 ASB15Q8WXK1 588 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 GIMAP5Q96F15 307 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 NPAS2Q99743 824 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 ACTRT3Q9BYD9 372 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 TRIM4Q9C037 500 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 SLC25A18Q9H1K4 315 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 MYLK2Q9H1R3 596 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 RAD21L1Q9H4I0 556 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 CORO2BQ9UQ03 480 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 GMEB1Q9Y692 573 aa14.79□□□□□ -0.04
FDPS-201ENST00000356657 WWP2O00308 870 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 NKX2-2O95096 273 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 AK1P00568 194 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 CT45A8P0DMV1 189 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 CT45A9P0DMV2 189 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 CHI3L1P36222 383 aaPredicted RBP14.78□□□□□ -0.04
FDPS-201ENST00000356657 MAP3K8P41279 467 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 ARG2P78540 354 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 PSG6Q00889 435 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 SF3A3Q12874 501 aaKnown RBP eCLIP14.78□□□□□ -0.048e-7■■■□□ 16
FDPS-201ENST00000356657 LY6DQ14210 128 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 CT45A2Q5DJT8 189 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 EXOSC6Q5RKV6 272 aaKnown RBP14.78□□□□□ -0.04
FDPS-201ENST00000356657 SAXO2Q658L1 398 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 FAM91A1Q658Y4 838 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 CDC73Q6P1J9 531 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 LINC00696Q6ZRV3 163 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 ASB18Q6ZVZ8 466 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 PCYOX1LQ8NBM8 494 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 BCAS4Q8TDM0 211 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 CMTM5Q96DZ9 223 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 SPACA9Q96E40 222 aaPredicted RBP14.78□□□□□ -0.04
FDPS-201ENST00000356657 MAGED4Q96JG8 741 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 SECISBP2Q96T21 854 aaKnown RBP14.78□□□□□ -0.04
FDPS-201ENST00000356657 SLC35A5Q9BS91 424 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 NXF5Q9H1B4 397 aaKnown RBP14.78□□□□□ -0.04
FDPS-201ENST00000356657 GPATCH2Q9NW75 528 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 THUMPD1Q9NXG2 353 aaKnown RBP14.78□□□□□ -0.04
FDPS-201ENST00000356657 TP53TG5Q9Y2B4 290 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 DTX4Q9Y2E6 619 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 ATRXP46100 2492 aa14.78□□□□□ -0.04
FDPS-201ENST00000356657 TRAV17A0A0B4J275 112 aa14.77□□□□□ -0.04
FDPS-201ENST00000356657 A8MVJ9 347 aa14.77□□□□□ -0.04
FDPS-201ENST00000356657 WDPCPO95876 746 aa14.77□□□□□ -0.04
FDPS-201ENST00000356657 ALOX5P09917 674 aa14.77□□□□□ -0.04
FDPS-201ENST00000356657 FBXO45P0C2W1 286 aa14.77□□□□□ -0.04
FDPS-201ENST00000356657 PRDX6P30041 224 aa14.77□□□□□ -0.04
FDPS-201ENST00000356657 LCN1P31025 176 aa14.77□□□□□ -0.04
FDPS-201ENST00000356657 KRT20P35900 424 aa14.77□□□□□ -0.04
FDPS-201ENST00000356657 NR0B1P51843 470 aaKnown RBP14.77□□□□□ -0.04
FDPS-201ENST00000356657 PRKAG1P54619 331 aa14.77□□□□□ -0.04
FDPS-201ENST00000356657 RPP38P78345 283 aaKnown RBP14.77□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms