RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 LY86O95711 162 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 NDUFB7P17568 137 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 WNT3AP56704 352 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 MINDY4Q4G0A6 757 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 MANEAQ5SRI9 462 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 KLBQ86Z14 1044 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 SLITRK4Q8IW52 837 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 ASZ1Q8WWH4 475 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 MRPL38Q96DV4 380 aaKnown RBP14.88□□□□□ -0.03
RTN3-205ENST00000356000 SPSB2Q99619 263 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 CDT1Q9H211 546 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 RNF122Q9H9V4 155 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 METTL1Q9UBP6 276 aaKnown RBP14.88□□□□□ -0.03
RTN3-205ENST00000356000 NDOR1Q9UHB4 597 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 TSC2P49815 1807 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 GBF1Q92538 1859 aa14.88□□□□□ -0.03
RTN3-205ENST00000356000 PARP14Q460N5 1801 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 TMEM218A2RU14 115 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 LILRB5O75023 590 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 ICOSLGO75144 302 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 OR2A4O95047 310 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 HIST1H2ABP04908 130 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 THP07101 528 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 ADORA2BP29275 332 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 C17orf99Q6UX52 265 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 HIST3H2AQ7L7L0 130 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 OAFQ86UD1 273 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 ZBTB8OSQ8IWT0 167 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 HIST1H2ACQ93077 130 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 OR2A7Q96R45 310 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 ABHD1Q96SE0 405 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 DPH2Q9BQC3 489 aaPredicted RBP14.87□□□□□ -0.03
RTN3-205ENST00000356000 C7orf50Q9BRJ6 194 aaKnown RBP14.87□□□□□ -0.03
RTN3-205ENST00000356000 MTG2Q9H4K7 406 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 ATP13A1Q9HD20 1204 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 ZNF302Q9NR11 478 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 ACSL6Q9UKU0 697 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 TMEM200CA6NKL6 621 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 HLA-DQB2P05538 268 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 HOXC4P09017 264 aaPredicted RBP14.87□□□□□ -0.03
RTN3-205ENST00000356000 RD3LP0DJH9 198 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 ZNF8P17098 575 aaPredicted RBP14.87□□□□□ -0.03
RTN3-205ENST00000356000 STARD6P59095 220 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 OR5M10Q6IEU7 315 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 SLC30A6Q6NXT4 461 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 NAA40Q86UY6 237 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 RELL2Q8NC24 303 aaPredicted RBP14.87□□□□□ -0.03
RTN3-205ENST00000356000 FAM71CQ8NEG0 241 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 SPPL2AQ8TCT8 520 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 GNPDA2Q8TDQ7 276 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 ZNF707Q96C28 371 aaPredicted RBP14.87□□□□□ -0.03
RTN3-205ENST00000356000 C14orf144Q96I85 54 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 ADAT1Q9BUB4 502 aaKnown RBP14.87□□□□□ -0.03
RTN3-205ENST00000356000 PTCH2Q9Y6C5 1203 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 DOCK1Q14185 1865 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 ANKRD36A6QL64 1941 aa14.87□□□□□ -0.03
RTN3-205ENST00000356000 STMND1H3BQB6 276 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 ARPC5O15511 151 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 RAB36O95755 333 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 CD79BP40259 229 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 GCGRP47871 477 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 SLC3A1Q07837 685 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 PDZK1IP1Q13113 114 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 RAB33AQ14088 237 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 TARBP2Q15633 366 aaKnown RBP14.86□□□□□ -0.03
RTN3-205ENST00000356000 SGO1Q5FBB7 561 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 NUDT18Q6ZVK8 323 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 OR52I1Q8NGK6 324 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 TADA1Q96BN2 335 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 CHFRQ96EP1 664 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 NEU1Q99519 415 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 C20orf85Q9H1P6 137 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 CA10Q9NS85 328 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 ASH2LQ9UBL3 628 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 ZNF236Q9UL36 1845 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 FNDC3AQ9Y2H6 1198 aaKnown RBP14.86□□□□□ -0.03
RTN3-205ENST00000356000 MED16Q9Y2X0 877 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 C2orf78A6NCI8 922 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 SLC9B1P1A6NJY1 282 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 TXNL1O43396 289 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 EIF4EP06730 217 aaKnown RBP14.86□□□□□ -0.03
RTN3-205ENST00000356000 BCKDHAP12694 445 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 CAP2P40123 477 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 RAB8AP61006 207 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 SIM1P81133 766 aaPredicted RBP14.86□□□□□ -0.03
RTN3-205ENST00000356000 FAM189BP81408 668 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 CEACAM20Q6UY09 585 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 GOLGA7Q7Z5G4 137 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 NEIL3Q8TAT5 605 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 LRTM1Q9HBL6 345 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 SARS2Q9NP81 518 aaKnown RBP14.86□□□□□ -0.03
RTN3-205ENST00000356000 RASL12Q9NYN1 266 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 FBXW11Q9UKB1 542 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 CBLCQ9ULV8 474 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 CBY1Q9Y3M2 126 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 IRAK3Q9Y616 596 aa14.86□□□□□ -0.03
RTN3-205ENST00000356000 DSPPQ9NZW4 1301 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 MID1O15344 667 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 B4GALT5O43286 388 aa14.85□□□□□ -0.03
RTN3-205ENST00000356000 GATBO75879 557 aaKnown RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms