RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 EXO5Q9H790 373 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 FOLH1BQ9HBA9 442 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 PFDN4Q9NQP4 134 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 FLRT3Q9NZU0 649 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 GIMAP2Q9UG22 337 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 ACAD8Q9UKU7 415 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 STK38LQ9Y2H1 464 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 FIS1Q9Y3D6 152 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 ZNF780BQ9Y6R6 833 aa15.28■□□□□ 0.04
PDLIM7-201ENST00000355572 MYO1GB0I1T2 1018 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 TP53I11O14683 189 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 TO15178 435 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 TSPAN2O60636 221 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 ICOSLGO75144 302 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 CDH16O75309 829 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 SPAG7O75391 227 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 JUNP05412 331 aaKnown RBP15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 HPNP05981 417 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 DDCP20711 480 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 DRD5P21918 477 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 ALDH3A1P30838 453 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 CHRNB4P30926 498 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 PTGER4P35408 488 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 ZNF763Q0D2J5 394 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 PLCXD2Q0VAA5 305 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 SNTB1Q13884 538 aaKnown RBP15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 C6orf163Q5TEZ5 329 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 LIPMQ5VYY2 423 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 TMEM198Q66K66 360 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 PLXDC2Q6UX71 529 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 ANGPTL8Q6UXH0 198 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 B3GNT6Q6ZMB0 384 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 MEX3BQ6ZN04 569 aaKnown RBP15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 YRDCQ86U90 279 aaKnown RBP15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 ULK2Q8IYT8 1036 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 WDSUB1Q8N9V3 476 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 CCDC63Q8NA47 563 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 ZBTB9Q96C00 473 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 CCDC126Q96EE4 140 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 HSPBAP1Q96EW2 488 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 TMEM41AQ96HV5 264 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 LURAP1Q96LR2 239 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 BTBD9Q96Q07 612 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 RTN4RQ9BZR6 473 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 GLIPR2Q9H4G4 154 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 MYNNQ9NPC7 610 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 QPCTLQ9NXS2 382 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 COQ3Q9NZJ6 369 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 MAPRE3Q9UPY8 281 aa15.27■□□□□ 0.04
PDLIM7-201ENST00000355572 FRG2CA6NGY1 282 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 FIGNL2A6NMB9 653 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 SNPHO15079 494 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 TRAPPC6AO75865 159 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 RSL1D1O76021 490 aaKnown RBP15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 NUDT17P0C025 328 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 MC3RP41968 323 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 CCT5P48643 541 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 DLX5P56178 289 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 NRG3P56975 720 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 PSG6Q00889 435 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 WLSQ5T9L3 541 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 TIGD3Q6B0B8 471 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 NOXRED1Q6NXP6 359 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 POMZP3Q6PJE2 187 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 ZCCHC23Q6ZST2 131 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 GDF7Q7Z4P5 450 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 RELL2Q8NC24 303 aaPredicted RBP15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 FAM83FQ8NEG4 500 aaPredicted RBP15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 OR10Q1Q8NGQ4 319 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 RDH11Q8TC12 318 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 NUDT8Q8WV74 236 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 RNF138Q8WVD3 245 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 ASB5Q8WWX0 329 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 GFM2Q969S9 779 aaKnown RBP15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 SARAFQ96BY9 339 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 APOPT1Q96IL0 206 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 FCRL1Q96LA6 429 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 FAM111AQ96PZ2 611 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 SECISBP2Q96T21 854 aaKnown RBP15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 TIMP4Q99727 224 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 SPOCK3Q9BQ16 436 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 OSBPL11Q9BXB4 747 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 UGT2B28Q9BY64 529 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 METTL7AQ9H8H3 244 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 SERHLQ9NQF3 203 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 MKS1Q9NXB0 559 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 PSME2Q9UL46 239 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 CREBBPQ92793 2442 aa15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 NUP214P35658 2090 aaPredicted RBP15.26■□□□□ 0.03
PDLIM7-201ENST00000355572 C15orf38-AP3S2A0A0A6YYH1 394 aa15.25■□□□□ 0.03
PDLIM7-201ENST00000355572 WDR1O75083 606 aa15.25■□□□□ 0.03
PDLIM7-201ENST00000355572 ERN1O75460 977 aaKnown RBP15.25■□□□□ 0.03
PDLIM7-201ENST00000355572 UROSP10746 265 aa15.25■□□□□ 0.03
PDLIM7-201ENST00000355572 NAGAP17050 411 aa15.25■□□□□ 0.03
PDLIM7-201ENST00000355572 BMP7P18075 431 aa15.25■□□□□ 0.03
PDLIM7-201ENST00000355572 MSX1P28360 303 aa15.25■□□□□ 0.03
PDLIM7-201ENST00000355572 MASP1P48740 699 aa15.25■□□□□ 0.03
PDLIM7-201ENST00000355572 TMED10P49755 219 aaKnown RBP15.25■□□□□ 0.03
PDLIM7-201ENST00000355572 GAS1P54826 345 aa15.25■□□□□ 0.03
PDLIM7-201ENST00000355572 HEPACAMQ14CZ8 416 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms