RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 IRAK4Q9NWZ3 460 aa20.91■□□□□ 0.94
NKX2-1-201ENST00000354822 KCNE3Q9Y6H6 103 aa20.91■□□□□ 0.94
NKX2-1-201ENST00000354822 IRGMA1A4Y4 181 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 SNTNA6NMZ2 147 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 CYP7B1O75881 506 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 HOXB2P14652 356 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 EFNB1P98172 346 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 ADAM15Q13444 863 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 TRAM2Q15035 370 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 KLHL22Q53GT1 634 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 AGAP7PQ5VUJ5 663 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 ENPP7Q6UWV6 458 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 OR9Q1Q8NGQ5 310 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 SLC6A17Q9H1V8 727 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 SRMSQ9H3Y6 488 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 HHATLQ9HCP6 504 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 KLHL28Q9NXS3 571 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 CLEC1BQ9P126 229 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 SEC14L4Q9UDX3 406 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 PRKYO43930 277 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 CSO75390 466 aaKnown RBP20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 PRKAR1BP31321 381 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 PTGER1P34995 402 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 ETV6P41212 452 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 ST3GAL3Q11203 375 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 CDC20Q12834 499 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 SFSWAPQ12872 951 aaKnown RBP20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 NFATC4Q14934 902 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 USP30Q70CQ3 517 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 C16orf62Q7Z3J2 963 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 SLC22A16Q86VW1 577 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 LYSMD2Q8IV50 215 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 NUAK2Q9H093 628 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 NTMQ9P121 344 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 CRNNQ9UBG3 495 aaPredicted RBP20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 PHF11Q9UIL8 331 aa20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 DIMT1Q9UNQ2 313 aaKnown RBP20.9■□□□□ 0.94
NKX2-1-201ENST00000354822 A0A1W2PQF6 199 aa20.89■□□□□ 0.94
NKX2-1-201ENST00000354822 POM121BA6NF01 834 aa20.89■□□□□ 0.94
NKX2-1-201ENST00000354822 APBB3O95704 486 aa20.89■□□□□ 0.94
NKX2-1-201ENST00000354822 SLC35G6P0C7Q6 338 aa20.89■□□□□ 0.94
NKX2-1-201ENST00000354822 CHRNEQ04844 493 aa20.89■□□□□ 0.94
NKX2-1-201ENST00000354822 MLLT11Q13015 90 aaPredicted RBP20.89■□□□□ 0.94
NKX2-1-201ENST00000354822 KIR2DS3Q14952 304 aa20.89■□□□□ 0.94
NKX2-1-201ENST00000354822 VN1R4Q7Z5H5 301 aa20.89■□□□□ 0.94
NKX2-1-201ENST00000354822 OR1E3Q8WZA6 343 aa20.89■□□□□ 0.94
NKX2-1-201ENST00000354822 SIPA1Q96FS4 1042 aa20.89■□□□□ 0.94
NKX2-1-201ENST00000354822 RIPOR3Q96MK2 946 aa20.89■□□□□ 0.94
NKX2-1-201ENST00000354822 SLC6A18Q96N87 628 aa20.89■□□□□ 0.94
NKX2-1-201ENST00000354822 CPNE5Q9HCH3 593 aa20.89■□□□□ 0.94
NKX2-1-201ENST00000354822 PRDM9Q9NQV7 894 aa20.89■□□□□ 0.94
NKX2-1-201ENST00000354822 CLEC2DQ9UHP7 191 aa20.89■□□□□ 0.94
NKX2-1-201ENST00000354822 TRANK1O15050 2925 aa20.89■□□□□ 0.93
NKX2-1-201ENST00000354822 A0A075B6Q4 140 aa20.89■□□□□ 0.93
NKX2-1-201ENST00000354822 SCAMP1O15126 338 aa20.89■□□□□ 0.93
NKX2-1-201ENST00000354822 ADAM23O75077 832 aa20.89■□□□□ 0.93
NKX2-1-201ENST00000354822 GPX5O75715 221 aa20.89■□□□□ 0.93
NKX2-1-201ENST00000354822 CKMT1AP12532 417 aa20.89■□□□□ 0.93
NKX2-1-201ENST00000354822 PPP2CBP62714 309 aa20.89■□□□□ 0.93
NKX2-1-201ENST00000354822 PPP2CAP67775 309 aa20.89■□□□□ 0.93
NKX2-1-201ENST00000354822 DNASE1L3Q13609 305 aa20.89■□□□□ 0.93
NKX2-1-201ENST00000354822 SYT14P1Q58G82 188 aa20.89■□□□□ 0.93
NKX2-1-201ENST00000354822 IQCF1Q8N6M8 205 aa20.89■□□□□ 0.93
NKX2-1-201ENST00000354822 KCT2Q8NC54 265 aa20.89■□□□□ 0.93
NKX2-1-201ENST00000354822 RNF217Q8TC41 542 aa20.89■□□□□ 0.93
NKX2-1-201ENST00000354822 ADAMTS15Q8TE58 950 aa20.89■□□□□ 0.93
NKX2-1-201ENST00000354822 JPH3Q8WXH2 748 aaPredicted RBP20.89■□□□□ 0.93
NKX2-1-201ENST00000354822 WDR92Q96MX6 357 aa20.89■□□□□ 0.93
NKX2-1-201ENST00000354822 PRRG3Q9BZD7 231 aa20.89■□□□□ 0.93
NKX2-1-201ENST00000354822 POLR2J2Q9GZM3 115 aaKnown RBP20.89■□□□□ 0.93
NKX2-1-201ENST00000354822 SYNPO2LQ9H987 977 aa20.89■□□□□ 0.93
NKX2-1-201ENST00000354822 ABCB10Q9NRK6 738 aa20.89■□□□□ 0.93
NKX2-1-201ENST00000354822 CHCHD3Q9NX63 227 aaKnown RBP20.89■□□□□ 0.93
NKX2-1-201ENST00000354822 ZNF624Q9P2J8 865 aaPredicted RBP20.89■□□□□ 0.93
NKX2-1-201ENST00000354822 MDC1Q14676 2089 aaKnown RBP20.88■□□□□ 0.93
NKX2-1-201ENST00000354822 GIMAP1-GIMAP5A0A087WTJ2 511 aa20.88■□□□□ 0.93
NKX2-1-201ENST00000354822 A0A087WUU8 490 aa20.88■□□□□ 0.93
NKX2-1-201ENST00000354822 URADA6NGE7 173 aa20.88■□□□□ 0.93
NKX2-1-201ENST00000354822 MYL12BO14950 172 aa20.88■□□□□ 0.93
NKX2-1-201ENST00000354822 RAB36O95755 333 aa20.88■□□□□ 0.93
NKX2-1-201ENST00000354822 TSPAN31Q12999 210 aa20.88■□□□□ 0.93
NKX2-1-201ENST00000354822 KRR1Q13601 381 aaKnown RBP20.88■□□□□ 0.93
NKX2-1-201ENST00000354822 SUZ12Q15022 739 aaKnown RBP20.88■□□□□ 0.93
NKX2-1-201ENST00000354822 SNAPC1Q16533 368 aa20.88■□□□□ 0.93
NKX2-1-201ENST00000354822 ACSM5Q6NUN0 579 aa20.88■□□□□ 0.93
NKX2-1-201ENST00000354822 RRM2BQ7LG56 351 aa20.88■□□□□ 0.93
NKX2-1-201ENST00000354822 LRRC25Q8N386 305 aaPredicted RBP20.88■□□□□ 0.93
NKX2-1-201ENST00000354822 PARP16Q8N5Y8 322 aa20.88■□□□□ 0.93
NKX2-1-201ENST00000354822 TEX47Q8TBZ9 253 aa20.88■□□□□ 0.93
NKX2-1-201ENST00000354822 GIMAP5Q96F15 307 aa20.88■□□□□ 0.93
NKX2-1-201ENST00000354822 LRR1Q96L50 414 aa20.88■□□□□ 0.93
NKX2-1-201ENST00000354822 EQTNQ9NQ60 294 aa20.88■□□□□ 0.93
NKX2-1-201ENST00000354822 MRPS18AQ9NVS2 196 aaKnown RBP20.88■□□□□ 0.93
NKX2-1-201ENST00000354822 TESQ9UGI8 421 aaKnown RBP20.88■□□□□ 0.93
NKX2-1-201ENST00000354822 KLHL3Q9UH77 587 aa20.88■□□□□ 0.93
NKX2-1-201ENST00000354822 TICRRQ7Z2Z1 1910 aa20.88■□□□□ 0.93
NKX2-1-201ENST00000354822 BTN3A3O00478 584 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 SNX4O95219 450 aa20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 ZNF888P0CJ79 500 aaPredicted RBP20.87■□□□□ 0.93
NKX2-1-201ENST00000354822 RPS3AP61247 264 aaKnown RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 101 ms