RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 ARHGAP11BQ3KRB8 267 aa17.42■□□□□ 0.38
PTN-201ENST00000348225 MINDY4Q4G0A6 757 aa17.42■□□□□ 0.38
PTN-201ENST00000348225 EXOSC6Q5RKV6 272 aaKnown RBP17.42■□□□□ 0.38
PTN-201ENST00000348225 OTUD3Q5T2D3 398 aaPredicted RBP17.42■□□□□ 0.38
PTN-201ENST00000348225 SHQ1Q6PI26 577 aaKnown RBP17.42■□□□□ 0.38
PTN-201ENST00000348225 MAGEE2Q8TD90 523 aaPredicted RBP17.42■□□□□ 0.38
PTN-201ENST00000348225 ZNF354BQ96LW1 612 aa17.42■□□□□ 0.38
PTN-201ENST00000348225 CACYBPQ9HB71 228 aaKnown RBP17.42■□□□□ 0.38
PTN-201ENST00000348225 SATB2Q9UPW6 733 aa17.42■□□□□ 0.38
PTN-201ENST00000348225 SH3GLB1Q9Y371 365 aa17.42■□□□□ 0.38
PTN-201ENST00000348225 AP4B1Q9Y6B7 739 aa17.42■□□□□ 0.38
PTN-201ENST00000348225 C7orf72A4D263 438 aa17.41■□□□□ 0.38
PTN-201ENST00000348225 A8MVJ9 347 aa17.41■□□□□ 0.38
PTN-201ENST00000348225 TNFRSF10AO00220 468 aa17.41■□□□□ 0.38
PTN-201ENST00000348225 ADAMDEC1O15204 470 aa17.41■□□□□ 0.38
PTN-201ENST00000348225 DYRK3O43781 588 aa17.41■□□□□ 0.38
PTN-201ENST00000348225 PRAMEF2O60811 474 aa17.41■□□□□ 0.38
PTN-201ENST00000348225 ALPPP05187 535 aa17.41■□□□□ 0.38
PTN-201ENST00000348225 TNNI3P19429 210 aa17.41■□□□□ 0.38
PTN-201ENST00000348225 DNAJA1P31689 397 aaKnown RBP17.41■□□□□ 0.38
PTN-201ENST00000348225 ALDH3A2P51648 485 aa17.41■□□□□ 0.38
PTN-201ENST00000348225 ZFP36L1Q07352 338 aaKnown RBP17.41■□□□□ 0.38
PTN-201ENST00000348225 IL11RAQ14626 422 aa17.41■□□□□ 0.38
PTN-201ENST00000348225 ZNHIT3Q15649 155 aaPredicted RBP17.41■□□□□ 0.38
PTN-201ENST00000348225 DUSP7Q16829 419 aa17.41■□□□□ 0.38
PTN-201ENST00000348225 IQCCQ4KMZ1 466 aa17.41■□□□□ 0.38
PTN-201ENST00000348225 WDR53Q7Z5U6 358 aaPredicted RBP17.41■□□□□ 0.38
PTN-201ENST00000348225 COX18Q8N8Q8 333 aa17.41■□□□□ 0.38
PTN-201ENST00000348225 AGBL5Q8NDL9 886 aa17.41■□□□□ 0.38
PTN-201ENST00000348225 CLIP3Q96DZ5 547 aa17.41■□□□□ 0.38
PTN-201ENST00000348225 ZNF300Q96RE9 604 aaPredicted RBP17.41■□□□□ 0.38
PTN-201ENST00000348225 SLC38A1Q9H2H9 487 aa17.41■□□□□ 0.38
PTN-201ENST00000348225 NDUFAF4Q9P032 175 aa17.41■□□□□ 0.38
PTN-201ENST00000348225 FAM32AQ9Y421 112 aaKnown RBP17.41■□□□□ 0.38
PTN-201ENST00000348225 DSPPQ9NZW4 1301 aa17.41■□□□□ 0.38
PTN-201ENST00000348225 DENRO43583 198 aaKnown RBP17.4■□□□□ 0.38
PTN-201ENST00000348225 HYAL3O43820 417 aaPredicted RBP17.4■□□□□ 0.38
PTN-201ENST00000348225 NME6O75414 186 aaPredicted RBP17.4■□□□□ 0.38
PTN-201ENST00000348225 DIRAS1O95057 198 aa17.4■□□□□ 0.38
PTN-201ENST00000348225 TNFRSF1BP20333 461 aa17.4■□□□□ 0.38
PTN-201ENST00000348225 FPR1P21462 350 aa17.4■□□□□ 0.38
PTN-201ENST00000348225 OR1E2P47887 323 aa17.4■□□□□ 0.38
PTN-201ENST00000348225 IST1P53990 364 aa17.4■□□□□ 0.38
PTN-201ENST00000348225 ZNF267Q14586 743 aaPredicted RBP17.4■□□□□ 0.38
PTN-201ENST00000348225 SF3A2Q15428 464 aaKnown RBP17.4■□□□□ 0.38
PTN-201ENST00000348225 MLIPQ5VWP3 458 aa17.4■□□□□ 0.38
PTN-201ENST00000348225 CHDHQ8NE62 594 aaPredicted RBP17.4■□□□□ 0.38
PTN-201ENST00000348225 GPR32P1Q8NGA4 272 aa17.4■□□□□ 0.38
PTN-201ENST00000348225 ATOH1Q92858 354 aaPredicted RBP17.4■□□□□ 0.38
PTN-201ENST00000348225 NRBF2Q96F24 287 aa17.4■□□□□ 0.38
PTN-201ENST00000348225 EPYCQ99645 322 aa17.4■□□□□ 0.38
PTN-201ENST00000348225 RBM4BQ9BQ04 359 aaKnown RBP17.4■□□□□ 0.38
PTN-201ENST00000348225 CNPPD1Q9BV87 410 aa17.4■□□□□ 0.38
PTN-201ENST00000348225 RBM4Q9BWF3 364 aaKnown RBP17.4■□□□□ 0.38
PTN-201ENST00000348225 OSBPL10Q9BXB5 764 aa17.4■□□□□ 0.38
PTN-201ENST00000348225 PINK1Q9BXM7 581 aa17.4■□□□□ 0.38
PTN-201ENST00000348225 SMPD3Q9NY59 655 aaPredicted RBP17.4■□□□□ 0.38
PTN-201ENST00000348225 SAMHD1Q9Y3Z3 626 aaKnown RBP17.4■□□□□ 0.38
PTN-201ENST00000348225 ENPP4Q9Y6X5 453 aa17.4■□□□□ 0.38
PTN-201ENST00000348225 U3KQV3 271 aa17.4■□□□□ 0.38
PTN-201ENST00000348225 WDFY4Q6ZS81 3184 aa17.4■□□□□ 0.38
PTN-201ENST00000348225 MYO15AQ9UKN7 3530 aa17.4■□□□□ 0.38
PTN-201ENST00000348225 OR2W5A6NFC9 320 aa17.39■□□□□ 0.38
PTN-201ENST00000348225 EFCAB7A8K855 629 aa17.39■□□□□ 0.38
PTN-201ENST00000348225 DNAJB5O75953 348 aa17.39■□□□□ 0.38
PTN-201ENST00000348225 FGF5P12034 268 aa17.39■□□□□ 0.38
PTN-201ENST00000348225 S1PR1P21453 382 aa17.39■□□□□ 0.38
PTN-201ENST00000348225 MAP3K8P41279 467 aa17.39■□□□□ 0.38
PTN-201ENST00000348225 PDX1P52945 283 aa17.39■□□□□ 0.38
PTN-201ENST00000348225 CHRNEQ04844 493 aa17.39■□□□□ 0.38
PTN-201ENST00000348225 CYP27C1Q4G0S4 372 aa17.39■□□□□ 0.38
PTN-201ENST00000348225 C6orf52Q5T4I8 152 aa17.39■□□□□ 0.38
PTN-201ENST00000348225 PWWP2BQ6NUJ5 590 aa17.39■□□□□ 0.38
PTN-201ENST00000348225 NAXDQ8IW45 347 aa17.39■□□□□ 0.38
PTN-201ENST00000348225 GPR151Q8TDV0 419 aa17.39■□□□□ 0.38
PTN-201ENST00000348225 HOXB13Q92826 284 aaPredicted RBP17.39■□□□□ 0.38
PTN-201ENST00000348225 LMF2Q9BU23 707 aaKnown RBP17.39■□□□□ 0.38
PTN-201ENST00000348225 EDEM2Q9BV94 578 aa17.39■□□□□ 0.38
PTN-201ENST00000348225 TGIF2Q9GZN2 237 aa17.39■□□□□ 0.38
PTN-201ENST00000348225 GABARAPL1Q9H0R8 117 aa17.39■□□□□ 0.38
PTN-201ENST00000348225 FOLH1BQ9HBA9 442 aa17.39■□□□□ 0.38
PTN-201ENST00000348225 OCIAD1Q9NX40 245 aa17.39■□□□□ 0.38
PTN-201ENST00000348225 USE1Q9NZ43 259 aa17.39■□□□□ 0.38
PTN-201ENST00000348225 WDR45Q9Y484 360 aa17.39■□□□□ 0.38
PTN-201ENST00000348225 HEMK1Q9Y5R4 338 aaPredicted RBP17.39■□□□□ 0.38
PTN-201ENST00000348225 IGKV3D-11A0A0A0MRZ8 115 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 TTC36A6NLP5 189 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 AGRPO00253 132 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 CDX4O14627 284 aaPredicted RBP17.39■□□□□ 0.37
PTN-201ENST00000348225 NKX2-2O95096 273 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 PABPC4LP0CB38 370 aaKnown RBP17.39■□□□□ 0.37
PTN-201ENST00000348225 RHCEP18577 417 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 RRM2P31350 389 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 PGDP52209 483 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 POU6F2P78424 691 aaPredicted RBP17.39■□□□□ 0.37
PTN-201ENST00000348225 RHAGQ02094 409 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 FUT7Q11130 342 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 DUSP8Q13202 625 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 VWA2Q5GFL6 755 aa17.39■□□□□ 0.37
PTN-201ENST00000348225 DCST2Q5T1A1 773 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms