RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 ECSITQ9BQ95 431 aa17.64■□□□□ 0.41
CHMP4A-201ENST00000347519 ITPAQ9BY32 194 aa17.64■□□□□ 0.41
CHMP4A-201ENST00000347519 PCDH17O14917 1159 aa17.63■□□□□ 0.41
CHMP4A-201ENST00000347519 NKX2-8O15522 239 aa17.63■□□□□ 0.41
CHMP4A-201ENST00000347519 BCAS2O75934 225 aaPredicted RBP17.63■□□□□ 0.41
CHMP4A-201ENST00000347519 BMP2P12643 396 aa17.63■□□□□ 0.41
CHMP4A-201ENST00000347519 TCN1P20061 433 aaPredicted RBP17.63■□□□□ 0.41
CHMP4A-201ENST00000347519 PRIM2P49643 509 aa17.63■□□□□ 0.41
CHMP4A-201ENST00000347519 CORO7P57737 925 aa17.63■□□□□ 0.41
CHMP4A-201ENST00000347519 Q0VFX4 171 aa17.63■□□□□ 0.41
CHMP4A-201ENST00000347519 MAPK11Q15759 364 aa17.63■□□□□ 0.41
CHMP4A-201ENST00000347519 SAMD4BQ5PRF9 694 aaKnown RBP17.63■□□□□ 0.41
CHMP4A-201ENST00000347519 BHLHB9Q6PI77 547 aa17.63■□□□□ 0.41
CHMP4A-201ENST00000347519 OLIG3Q7RTU3 272 aa17.63■□□□□ 0.41
CHMP4A-201ENST00000347519 NET1Q7Z628 596 aaPredicted RBP17.63■□□□□ 0.41
CHMP4A-201ENST00000347519 RAB43Q86YS6 212 aa17.63■□□□□ 0.41
CHMP4A-201ENST00000347519 SLC9A6Q92581 669 aa17.63■□□□□ 0.41
CHMP4A-201ENST00000347519 JADE3Q92613 823 aa17.63■□□□□ 0.41
CHMP4A-201ENST00000347519 GATA6Q92908 595 aa17.63■□□□□ 0.41
CHMP4A-201ENST00000347519 MAL2Q969L2 176 aa17.63■□□□□ 0.41
CHMP4A-201ENST00000347519 VMP1Q96GC9 406 aa17.63■□□□□ 0.41
CHMP4A-201ENST00000347519 LMF2Q9BU23 707 aaKnown RBP17.63■□□□□ 0.41
CHMP4A-201ENST00000347519 LIN28AQ9H9Z2 209 aaKnown RBP17.63■□□□□ 0.41
CHMP4A-201ENST00000347519 FAF1Q9UNN5 650 aaPredicted RBP17.63■□□□□ 0.41
CHMP4A-201ENST00000347519 NSG1A0A0A6YYJ2 146 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 TRBV11-1A0A0K0K1C0 115 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 GXYLT2A0PJZ3 443 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 EFSO43281 561 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 CAPNS1P04632 268 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 KHKP50053 298 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 DSTNP60981 165 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 PSG6Q00889 435 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 FUT5Q11128 374 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 FADDQ13158 208 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 EBPQ15125 230 aaKnown RBP17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 NNATQ16517 81 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 BTBD16Q32M84 506 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 C16orf47Q6ZP98 133 aaPredicted RBP17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 SERPINA11Q86U17 422 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 ULK2Q8IYT8 1036 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 LGI4Q8N135 537 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 CDRT4Q8N9R6 151 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 SNIP1Q8TAD8 396 aaKnown RBP17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 KCNE4Q8WWG9 221 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 PIK3R3Q92569 461 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 CDS1Q92903 461 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 ADIPOR1Q96A54 375 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 RAD21L1Q9H4I0 556 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 ALG2Q9H553 416 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 CORO2BQ9UQ03 480 aa17.62■□□□□ 0.41
CHMP4A-201ENST00000347519 CDC14CA4D256 554 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 TMEM200CA6NKL6 621 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 FAM220BPB1ANY3 271 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 NKX2-2O95096 273 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 HPP00738 406 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 CT45A8P0DMV1 189 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 CT45A9P0DMV2 189 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 HSD17B1P14061 328 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 MYBPC3Q14896 1274 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 CYP51A1Q16850 503 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 CT45A2Q5DJT8 189 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 GCNT6Q5T4J0 391 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 PLAG1Q6DJT9 500 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 ZCCHC12Q6PEW1 402 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 FBXW8Q8N3Y1 598 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 ZNF441Q8N8Z8 693 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 ZNF248Q8NDW4 579 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 OR4N2Q8NGD1 307 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 ELP5Q8TE02 316 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 ADAMTS15Q8TE58 950 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 XAGE5Q8WWM1 108 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 MCUR1Q96AQ8 359 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 NACC2Q96BF6 587 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 WWTR1Q9GZV5 400 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 PCDHAC1Q9H158 963 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 COPS7AQ9UBW8 275 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 PRODH2Q9UF12 536 aa17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 GPR55Q9Y2T6 319 aaPredicted RBP17.61■□□□□ 0.41
CHMP4A-201ENST00000347519 ASPMQ8IZT6 3477 aa17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 KLK10O43240 276 aa17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 ALOX5P09917 674 aa17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 ARAFP10398 606 aa17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 NQO1P15559 274 aaKnown RBP17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 GABRA3P34903 492 aa17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 RNF4P78317 190 aa17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 MS4A2Q01362 244 aa17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 EXT1Q16394 746 aa17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 SYPL1Q16563 259 aa17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 ST3GAL2Q16842 350 aa17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 MICU2Q8IYU8 434 aa17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 ANKFN1Q8N957 763 aa17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 OR2T12Q8NG77 320 aa17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 M1APQ8TC57 530 aa17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 THAP3Q8WTV1 239 aaPredicted RBP17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 REXO5Q96IC2 774 aaKnown RBP17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 GAL3ST4Q96RP7 486 aa17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 LMF1Q96S06 567 aa17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 KCTD14Q9BQ13 255 aaPredicted RBP17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 EFHD1Q9BUP0 239 aa17.6■□□□□ 0.41
CHMP4A-201ENST00000347519 NXF5Q9H1B4 397 aaKnown RBP17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms