RNA–Protein interactions for RNA: ENST00000347471.8

SMARCC2-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCC2, Length 3,839 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-202ENST00000347471 LRIT3Q3SXY7 679 aa16.09■□□□□ 0.17
SMARCC2-202ENST00000347471 DEFB123Q8N688 67 aa16.09■□□□□ 0.17
SMARCC2-202ENST00000347471 FBXO34Q9NWN3 711 aa16.09■□□□□ 0.17
SMARCC2-202ENST00000347471 GPR83Q9NYM4 423 aa16.09■□□□□ 0.17
SMARCC2-202ENST00000347471 TVP23BQ9NYZ1 205 aa16.09■□□□□ 0.17
SMARCC2-202ENST00000347471 ZNF182P17025 639 aaPredicted RBP16.09■□□□□ 0.17
SMARCC2-202ENST00000347471 CNR2P34972 360 aa16.09■□□□□ 0.17
SMARCC2-202ENST00000347471 OR1D5P58170 312 aa16.09■□□□□ 0.17
SMARCC2-202ENST00000347471 ZNF267Q14586 743 aaPredicted RBP16.09■□□□□ 0.17
SMARCC2-202ENST00000347471 LAIR2Q6ISS4 152 aa16.09■□□□□ 0.17
SMARCC2-202ENST00000347471 PLEKHM3Q6ZWE6 761 aa16.09■□□□□ 0.17
SMARCC2-202ENST00000347471 ENTHD1Q8IYW4 607 aa16.09■□□□□ 0.17
SMARCC2-202ENST00000347471 OR52P1PQ8NH57 321 aa16.09■□□□□ 0.17
SMARCC2-202ENST00000347471 COPS4Q9BT78 406 aa16.09■□□□□ 0.17
SMARCC2-202ENST00000347471 SPATA5L1Q9BVQ7 753 aa16.09■□□□□ 0.17
SMARCC2-202ENST00000347471 DNAJC27Q9NZQ0 273 aa16.09■□□□□ 0.17
SMARCC2-202ENST00000347471 CNIH4Q9P003 139 aa16.09■□□□□ 0.17
SMARCC2-202ENST00000347471 LRIT1Q9P2V4 623 aa16.09■□□□□ 0.17
SMARCC2-202ENST00000347471 POFUT2Q9Y2G5 429 aa16.09■□□□□ 0.17
SMARCC2-202ENST00000347471 WDFY4Q6ZS81 3184 aa16.08■□□□□ 0.17
SMARCC2-202ENST00000347471 SLC16A6O15403 523 aa16.08■□□□□ 0.17
SMARCC2-202ENST00000347471 SEMA7AO75326 666 aa16.08■□□□□ 0.17
SMARCC2-202ENST00000347471 ATE1O95260 518 aa16.08■□□□□ 0.17
SMARCC2-202ENST00000347471 CD247P20963 164 aa16.08■□□□□ 0.17
SMARCC2-202ENST00000347471 RACK1P63244 317 aaKnown RBP16.08■□□□□ 0.17
SMARCC2-202ENST00000347471 DBPQ10586 325 aaPredicted RBP16.08■□□□□ 0.17
SMARCC2-202ENST00000347471 PTGES3Q15185 160 aaKnown RBP16.08■□□□□ 0.17
SMARCC2-202ENST00000347471 CLIP4Q8N3C7 705 aa16.08■□□□□ 0.17
SMARCC2-202ENST00000347471 GALNT15Q8N3T1 639 aa16.08■□□□□ 0.17
SMARCC2-202ENST00000347471 ACTRT3Q9BYD9 372 aa16.08■□□□□ 0.17
SMARCC2-202ENST00000347471 RBM38Q9H0Z9 239 aaKnown RBP16.08■□□□□ 0.17
SMARCC2-202ENST00000347471 TAS2R16Q9NYV7 291 aa16.08■□□□□ 0.17
SMARCC2-202ENST00000347471 PCDHGA6Q9Y5G7 932 aa16.08■□□□□ 0.17
SMARCC2-202ENST00000347471 TTC28Q96AY4 2481 aa16.08■□□□□ 0.17
SMARCC2-202ENST00000347471 CACNA1EQ15878 2313 aa16.08■□□□□ 0.16
SMARCC2-202ENST00000347471 CPED1A4D0V7 1026 aa16.08■□□□□ 0.16
SMARCC2-202ENST00000347471 A8MVJ9 347 aa16.08■□□□□ 0.16
SMARCC2-202ENST00000347471 RGS10O43665 173 aa16.08■□□□□ 0.16
SMARCC2-202ENST00000347471 LCKP06239 509 aa16.08■□□□□ 0.16
SMARCC2-202ENST00000347471 OR1D4P47884 311 aa16.08■□□□□ 0.16
SMARCC2-202ENST00000347471 FUT5Q11128 374 aa16.08■□□□□ 0.16
SMARCC2-202ENST00000347471 ZNF730Q6ZMV8 503 aa16.08■□□□□ 0.16
SMARCC2-202ENST00000347471 TTLL10Q6ZVT0 673 aa16.08■□□□□ 0.16
SMARCC2-202ENST00000347471 KLHL6Q8WZ60 621 aa16.08■□□□□ 0.16
SMARCC2-202ENST00000347471 ZNF681Q96N22 645 aa16.08■□□□□ 0.16
SMARCC2-202ENST00000347471 KCMF1Q9P0J7 381 aa16.08■□□□□ 0.16
SMARCC2-202ENST00000347471 AHCYL1O43865 530 aa16.08■□□□□ 0.16
SMARCC2-202ENST00000347471 CDC42P60953 191 aa16.08■□□□□ 0.16
SMARCC2-202ENST00000347471 HNRNPKP61978 463 aaKnown RBP eCLIP16.08■□□□□ 0.161e-7■■■□□ 15.1
SMARCC2-202ENST00000347471 BTG2P78543 158 aa16.08■□□□□ 0.16
SMARCC2-202ENST00000347471 OR4K5Q8NGD3 323 aa16.08■□□□□ 0.16
SMARCC2-202ENST00000347471 DHCR7Q9UBM7 475 aaKnown RBP16.08■□□□□ 0.16
SMARCC2-202ENST00000347471 SLC22A7Q9Y694 548 aa16.08■□□□□ 0.16
SMARCC2-202ENST00000347471 RP1P56715 2156 aa16.08■□□□□ 0.16
SMARCC2-202ENST00000347471 URB1O60287 2271 aaKnown RBP16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 AP3D1O14617 1153 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 TOR1BO14657 336 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 DNAJB5O75953 348 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 CSF2P04141 144 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 HTR1AP08908 422 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 GSTM2P28161 218 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 PODNL1Q6PEZ8 512 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 SLC7A5P2Q9GIP4 190 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 PTTG2Q9NZH5 202 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 CENPVL1A0A0U1RR11 272 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 CT62P0C5K7 136 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 ITGAMP11215 1152 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 MAOAP21397 527 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 IFNA8P32881 189 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 EMX1Q04741 257 aaPredicted RBP16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 C1orf189Q5VU69 101 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 MFSD12Q6NUT3 480 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 FAHD1Q6P587 224 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 TSPYL5Q86VY4 417 aaPredicted RBP16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 SLC30A8Q8IWU4 369 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 MAT2BQ9NZL9 334 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 MUTYHQ9UIF7 546 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 PILRAQ9UKJ1 303 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 SIT1Q9Y3P8 196 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 IGHV5-51A0A0C4DH38 117 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 GALR3O60755 368 aaPredicted RBP16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 ELAVL4P26378 380 aaKnown RBP16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 MVKQ03426 396 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 GNA13Q14344 377 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 CASP12Q6UXS9 341 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 SHISA6Q6ZSJ9 500 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 BBS10Q8TAM1 723 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 SEMA6CQ9H3T2 930 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 ZSCAN32Q9NX65 697 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 MS4A12Q9NXJ0 267 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 POMT2Q9UKY4 750 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 NDRG4Q9ULP0 352 aaKnown RBP16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 ZNF232Q9UNY5 417 aa16.07■□□□□ 0.16
SMARCC2-202ENST00000347471 PNMA8CA0A1B0GUJ8 204 aa16.06■□□□□ 0.16
SMARCC2-202ENST00000347471 RECKO95980 971 aa16.06■□□□□ 0.16
SMARCC2-202ENST00000347471 PDGFBP01127 241 aaPredicted RBP16.06■□□□□ 0.16
SMARCC2-202ENST00000347471 STSP08842 583 aa16.06■□□□□ 0.16
SMARCC2-202ENST00000347471 CHMP24386 653 aa16.06■□□□□ 0.16
SMARCC2-202ENST00000347471 SSTR4P31391 388 aa16.06■□□□□ 0.16
SMARCC2-202ENST00000347471 FRKP42685 505 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms