RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 LRIT1Q9P2V4 623 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 E7ESA3 106 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 IFNGR1P15260 489 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 PLEKHN1Q494U1 663 aaPredicted RBP14.24□□□□□ -0.13
UBE3B-202ENST00000342494 TMEM69Q5SWH9 247 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 TMEFF1Q8IYR6 380 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 TMIEQ8NEW7 156 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 OR52N2Q8NGI0 321 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 SCGB1C1Q8TD33 95 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 ISG20Q96AZ6 181 aaKnown RBP14.24□□□□□ -0.13
UBE3B-202ENST00000342494 EXTL2Q9UBQ6 330 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 SMCO3A2RU48 225 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 H7C417 338 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 SFTPBP07988 381 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 CD79AP11912 226 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 XCR1P46094 333 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 MPP7Q5T2T1 576 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 MCATQ8IVS2 390 aaKnown RBP14.24□□□□□ -0.13
UBE3B-202ENST00000342494 SHISA4Q96DD7 197 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 MOCOSQ96EN8 888 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 MS4A4AQ96JQ5 239 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 ARL5BQ96KC2 179 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 BEX2Q9BXY8 128 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 BEX1Q9HBH7 125 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 MOV10Q9HCE1 1003 aaKnown RBP14.24□□□□□ -0.13
UBE3B-202ENST00000342494 TREM1Q9NP99 234 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 IL17CQ9P0M4 197 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 PCTPQ9UKL6 214 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 VDAC3Q9Y277 283 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 SPEF1Q9Y4P9 236 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 GMEB1Q9Y692 573 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 BCAT2O15382 392 aaPredicted RBP14.24□□□□□ -0.13
UBE3B-202ENST00000342494 LAMP1P11279 417 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 MAOBP27338 520 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 GNMTQ14749 295 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 CNPY1Q3B7I2 92 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 FAM180BQ6P0A1 224 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 PNCKQ6P2M8 343 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 EID2Q8N6I1 236 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 RFT1Q96AA3 541 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 COL2A1P02458 1487 aaPredicted RBP14.24□□□□□ -0.13
UBE3B-202ENST00000342494 LOC102723532A0A0G2JNH3 316 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 CLIC3O95833 236 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 SLC6A11P48066 632 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 MRPS21P82921 87 aaKnown RBP14.24□□□□□ -0.13
UBE3B-202ENST00000342494 CD83Q01151 205 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 PTCRAQ6ISU1 281 aaPredicted RBP14.24□□□□□ -0.13
UBE3B-202ENST00000342494 RANBP10Q6VN20 620 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 PPP1R3BQ86XI6 285 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 OR52E1Q8NGJ3 308 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 DTD2Q96FN9 168 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 HINT2Q9BX68 163 aa14.24□□□□□ -0.13
UBE3B-202ENST00000342494 FAM189A1O60320 539 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 APLNRP35414 380 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 EFR3AQ14156 821 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 KANK2Q63ZY3 851 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 ZNF517Q6ZMY9 492 aaPredicted RBP14.23□□□□□ -0.13
UBE3B-202ENST00000342494 FKBP10Q96AY3 582 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 SLC41A3Q96GZ6 507 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 FAM46AQ96IP4 442 aaKnown RBP14.23□□□□□ -0.13
UBE3B-202ENST00000342494 LRR1Q96L50 414 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 PRSS38A1L453 326 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 IFNA7P01567 189 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 PET100P0DJ07 73 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 SLC7A9P82251 487 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 TAP2Q03519 686 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 ATXN7L3Q14CW9 347 aaPredicted RBP14.23□□□□□ -0.13
UBE3B-202ENST00000342494 STEAP4Q687X5 459 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 LCTLQ6UWM7 567 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 C3P1Q6ZMU1 363 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 DCDC5Q6ZRR9 648 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 VWA5B2Q8N398 1253 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 ACBD7Q8N6N7 88 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 GPR26Q8NDV2 337 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 CNIH3Q8TBE1 160 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 SIT1Q9Y3P8 196 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 HTRA2O43464 458 aaPredicted RBP14.23□□□□□ -0.13
UBE3B-202ENST00000342494 EN2P19622 333 aaPredicted RBP14.23□□□□□ -0.13
UBE3B-202ENST00000342494 GDF1P27539 372 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 AIMP2Q13155 320 aaKnown RBP14.23□□□□□ -0.13
UBE3B-202ENST00000342494 BLOC1S3Q6QNY0 202 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 LIPIQ6XZB0 460 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 DCBLD2Q96PD2 775 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 MYNNQ9NPC7 610 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 SAGE1Q9NXZ1 904 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 LCATP04180 440 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 GKN3PP0CG01 181 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 SLC6A8P48029 635 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 CDNFQ49AH0 187 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 FAM76BQ5HYJ3 339 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 CYS1Q717R9 158 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 NRMQ8IXM6 262 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 GCDHQ92947 438 aaPredicted RBP14.23□□□□□ -0.13
UBE3B-202ENST00000342494 SPTSSAQ969W0 71 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 APIPQ96GX9 242 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 MCOLN1Q9GZU1 580 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 NELFAQ9H3P2 528 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 SLAMF7Q9NQ25 335 aa14.23□□□□□ -0.13
UBE3B-202ENST00000342494 SACM1LQ9NTJ5 587 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms