RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 SERPINA12Q8IW75 414 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 GATSQ8NAP1 163 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 OR2T33Q8NG76 320 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 DDX31Q9H8H2 851 aaKnown RBP11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 MUTYHQ9UIF7 546 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 SPTBP11277 2137 aa11.77□□□□□ -0.53
SNRNP48-201ENST00000342415 ATG2BQ96BY7 2078 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 URADA6NGE7 173 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 BLOC1S5-TXNDC5H3BN57 136 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 GKN3PP0CG01 181 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 CTBP2P56545 445 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 TSPAN5P62079 268 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 PRKCDQ05655 676 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 NDUFA9Q16795 377 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 CCNJQ5T5M9 372 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 C8orf82Q6P1X6 216 aaPredicted RBP11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 CD300LGQ6UXG3 332 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 ACBD7Q8N6N7 88 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 DPH1Q9BZG8 443 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 MED20Q9H944 212 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 TCF7L1Q9HCS4 588 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 SLC35C2Q9NQQ7 365 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 MGAT4AQ9UM21 535 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 BACE2Q9Y5Z0 518 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 TMEM221A6NGB7 291 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 SOBPA7XYQ1 873 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 BMP8BP34820 402 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 MC3RP41968 323 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 MINDY4Q4G0A6 757 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 BMP8AQ7Z5Y6 402 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 PXYLP1Q8TE99 480 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 OSTF1Q92882 214 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 C1QTNF7Q9BXJ2 289 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 THSD1Q9NS62 852 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 TEX10Q9NXF1 929 aaPredicted RBP11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 CKAP5Q14008 2032 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 ANKRD31Q8N7Z5 1873 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 NUPL2O15504 423 aaKnown RBP11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 C1orf105O95561 183 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 NFATC1O95644 943 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 TIMP2P16035 220 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 IGFBP4P22692 258 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 DNASE1P24855 282 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 TAP2Q03519 686 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 SNTB2Q13425 540 aaKnown RBP11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 GLCCI1Q86VQ1 547 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 OR52E4Q8NGH9 312 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 OR2A12Q8NGT7 310 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 BCL7CQ8WUZ0 217 aaPredicted RBP11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 TSEN15Q8WW01 171 aaKnown RBP11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 SPRYD4Q8WW59 207 aaPredicted RBP11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 YIPF6Q96EC8 236 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 C16orf58Q96GQ5 468 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 PKMYT1Q99640 499 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 DOK1Q99704 481 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 PCBD2Q9H0N5 130 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 FBXO8Q9NRD0 319 aa11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 EXOSC1Q9Y3B2 195 aaKnown RBP11.76□□□□□ -0.53
SNRNP48-201ENST00000342415 DUXAA6NLW8 204 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 CSO75390 466 aaKnown RBP11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 ERP29P30040 261 aaKnown RBP11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 ATXN7L3Q14CW9 347 aaPredicted RBP11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 KLHDC8AQ8IYD2 350 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 GJD3Q8N144 294 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 POMGNT2Q8NAT1 580 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 LINC01599Q8WXQ3 324 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 SPATA9Q9BWV2 254 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 TXNL4BQ9NX01 149 aaKnown RBP11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 SIPA1L1O43166 1804 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 FNTBP49356 437 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 C6orf132Q5T0Z8 1188 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 NXNL2Q5VZ03 156 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 HLA-DQA1Q5Y7H0 255 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 XKRXQ6PP77 449 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 SLCO4C1Q6ZQN7 724 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 OAFQ86UD1 273 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 VRK2Q86Y07 508 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 SLC7A13Q8TCU3 470 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 BRF2Q9HAW0 419 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 ACER3Q9NUN7 267 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 USP36Q9P275 1121 aaKnown RBP11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 MBD1Q9UIS9 605 aaPredicted RBP11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 CABIN1Q9Y6J0 2220 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 ANXA2P2A6NMY6 339 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 A8MUA0 341 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 ANXA2P07355 339 aaKnown RBP11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 ARAFP10398 606 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 FLYWCH1Q4VC44 716 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 FAM205BPQ63HN1 556 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 PARS2Q7L3T8 475 aaKnown RBP11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 TMED4Q7Z7H5 227 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 GNPDA2Q8TDQ7 276 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 PMEPA1Q969W9 287 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 CCDC120Q96HB5 630 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 COMMD9Q9P000 198 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 A0A1W2PP55 124 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 TEX46H3BTG2 121 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 M0R082 166 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 PRKYO43930 277 aa11.75□□□□□ -0.53
SNRNP48-201ENST00000342415 FMO6PO60774 539 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms