RNA–Protein interactions for RNA: ENST00000341360.6

ATP2B4-201, Transcript of ATPase plasma membrane Ca2+ transporting 4, humanhuman

TSL 1 (best) BASIC

Gene ATP2B4, Length 4,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4-201ENST00000341360 ZNF709Q8N972 641 aa7.33□□□□□ -1.24
ATP2B4-201ENST00000341360 PAPD5Q8NDF8 572 aaKnown RBP7.33□□□□□ -1.24
ATP2B4-201ENST00000341360 RAB8BQ92930 207 aa7.33□□□□□ -1.24
ATP2B4-201ENST00000341360 C12orf43Q96C57 262 aaKnown RBP7.33□□□□□ -1.24
ATP2B4-201ENST00000341360 RHBDF1Q96CC6 855 aa7.33□□□□□ -1.24
ATP2B4-201ENST00000341360 ISOC1Q96CN7 298 aa7.33□□□□□ -1.24
ATP2B4-201ENST00000341360 TCTN2Q96GX1 697 aa7.33□□□□□ -1.24
ATP2B4-201ENST00000341360 SLC30A2Q9BRI3 323 aa7.33□□□□□ -1.24
ATP2B4-201ENST00000341360 METTL8Q9H825 291 aaKnown RBP7.33□□□□□ -1.24
ATP2B4-201ENST00000341360 BOKQ9UMX3 212 aaPredicted RBP7.33□□□□□ -1.24
ATP2B4-201ENST00000341360 EDARQ9UNE0 448 aa7.33□□□□□ -1.24
ATP2B4-201ENST00000341360 OR2AT4A6NND4 320 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 ZFAND5O76080 213 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 CEBPBP17676 345 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 GLDCP23378 1020 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 AGTR2P50052 363 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 DIO3P55073 304 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 INHBCP55103 352 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 PCBD1P61457 104 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 TSTQ16762 297 aaKnown RBP7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 NDUFAF5Q5TEU4 345 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 GPR139Q6DWJ6 353 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 DGLUCYQ7Z3D6 616 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 ISCA2Q86U28 154 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 AMIGO3Q86WK7 504 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 FBXO27Q8NI29 283 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 IP6K3Q96PC2 410 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 TBX5Q99593 518 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 ANKRD60Q9BZ19 345 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 KLHL13Q9P2N7 655 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 PCDHA9Q9Y5H5 950 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 HCFC2Q9Y5Z7 792 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 BORCS7-ASMTA0A0B4J1R7 106 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 CXorf51AA0A1B0GTR3 108 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 ZCWPW2A0A1B0GU75 182 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 GRXCR1A8MXD5 290 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 ARNTLO00327 626 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 TNFRSF10CO14798 259 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 RPS17P08708 135 aaKnown RBP7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 CDK4P11802 303 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 TNFSF4P23510 183 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 S100A7P31151 101 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 PCGF2P35227 344 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 ACTBP60709 375 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 ACTG1P63261 375 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 PITX1P78337 314 aaPredicted RBP7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 SLC3A1Q07837 685 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 SLC10A2Q12908 348 aaPredicted RBP7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 GGTA1PQ4G0N0 100 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 FAM205BPQ63HN1 556 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 VWA5B2Q8N398 1253 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 OR14A16Q8NHC5 309 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 RPLP0P6Q8NHW5 317 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 HTRA1Q92743 480 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 HSPBAP1Q96EW2 488 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 C19orf43Q9BQ61 176 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 HDAC8Q9BY41 377 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 TOR3AQ9H497 397 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 SDR39U1Q9NRG7 319 aaPredicted RBP7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 SLC22A7Q9Y694 548 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 GOLGA4Q13439 2230 aaKnown RBP7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 C2orf92A0A1B0GVN3 265 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 ZNF860A6NHJ4 632 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 RBBP9O75884 186 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 SLC16A8O95907 504 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 TFAP2AP05549 437 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 AZGP1P25311 298 aaKnown RBP7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 FKBP2P26885 142 aaKnown RBP7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 P2RY2P41231 377 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 CD97P48960 835 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 HK3P52790 923 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 FAM189BP81408 668 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 SHC2P98077 582 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 MAB21L1Q13394 359 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 SGCAQ16586 387 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 PGBD2Q6P3X8 592 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 NCCRP1Q6ZVX7 275 aaPredicted RBP7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 LRRTM3Q86VH5 581 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 TSPYL5Q86VY4 417 aaPredicted RBP7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 PPP1R3BQ86XI6 285 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 ZNF619Q8N2I2 560 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 OR7G3Q8NG95 312 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 OR9I1Q8NGQ6 314 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 CD200R1Q8TD46 325 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 TSACCQ96A04 125 aaPredicted RBP7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 FAM46BQ96A09 425 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 SLC39A13Q96H72 371 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 ZNF597Q96LX8 424 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 MARCH4Q9P2E8 410 aaPredicted RBP7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 POU2F3Q9UKI9 436 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 HS3ST3A1Q9Y663 406 aa7.32□□□□□ -1.24
ATP2B4-201ENST00000341360 TMEM265A0A087WTH1 108 aa7.31□□□□□ -1.24
ATP2B4-201ENST00000341360 GIMAP1-GIMAP5A0A087WTJ2 511 aa7.31□□□□□ -1.24
ATP2B4-201ENST00000341360 TCRBV5S1A1TA0A578 114 aa7.31□□□□□ -1.24
ATP2B4-201ENST00000341360 OR5K3A6NET4 321 aa7.31□□□□□ -1.24
ATP2B4-201ENST00000341360 ATE1O95260 518 aa7.31□□□□□ -1.24
ATP2B4-201ENST00000341360 BMP2P12643 396 aa7.31□□□□□ -1.24
ATP2B4-201ENST00000341360 ZNF140P52738 457 aaPredicted RBP7.31□□□□□ -1.24
ATP2B4-201ENST00000341360 MRPS10P82664 201 aaKnown RBP7.31□□□□□ -1.24
ATP2B4-201ENST00000341360 DMWDQ09019 674 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms