RNA–Protein interactions for RNA: ENST00000340342.10

CTSL-201, Transcript of cathepsin L, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSL, Length 1,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSL-201ENST00000340342 NPSR1Q6W5P4 371 aa13.11□□□□□ -0.31
CTSL-201ENST00000340342 OR8J2Q8NGG1 315 aa13.11□□□□□ -0.31
CTSL-201ENST00000340342 OR5M3Q8NGP4 307 aa13.11□□□□□ -0.31
CTSL-201ENST00000340342 FAR1Q8WVX9 515 aa13.11□□□□□ -0.31
CTSL-201ENST00000340342 TP53INP1Q96A56 240 aa13.11□□□□□ -0.31
CTSL-201ENST00000340342 CCDC28BQ9BUN5 200 aa13.11□□□□□ -0.31
CTSL-201ENST00000340342 FAM107BQ9H098 131 aa13.11□□□□□ -0.31
CTSL-201ENST00000340342 RABEP2Q9H5N1 569 aa13.11□□□□□ -0.31
CTSL-201ENST00000340342 CXorf36Q9H7Y0 433 aa13.11□□□□□ -0.31
CTSL-201ENST00000340342 EQTNQ9NQ60 294 aa13.11□□□□□ -0.31
CTSL-201ENST00000340342 SDR39U1Q9NRG7 319 aaPredicted RBP13.11□□□□□ -0.31
CTSL-201ENST00000340342 TAS2R9Q9NYW1 312 aa13.11□□□□□ -0.31
CTSL-201ENST00000340342 MAPRE3Q9UPY8 281 aa13.11□□□□□ -0.31
CTSL-201ENST00000340342 NTNG1Q9Y2I2 539 aa13.11□□□□□ -0.31
CTSL-201ENST00000340342 CFLARO15519 480 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 COQ9O75208 318 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 ERN1O75460 977 aaKnown RBP13.1□□□□□ -0.31
CTSL-201ENST00000340342 CBX6O95503 412 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 SP1P08047 785 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 FBXO45P0C2W1 286 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 CT45A8P0DMV1 189 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 CT45A9P0DMV2 189 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 CD46P15529 392 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 ABCD3P28288 659 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 PPICP45877 212 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 ZFP36L2P47974 494 aaKnown RBP13.1□□□□□ -0.31
CTSL-201ENST00000340342 HBA1P69905 142 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 MAPKAPK3Q16644 382 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 ZNF791Q3KP31 576 aaPredicted RBP13.1□□□□□ -0.31
CTSL-201ENST00000340342 CT45A2Q5DJT8 189 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 PAOXQ6QHF9 649 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 OPN5Q6U736 354 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 FAM180AQ6UWF9 173 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 GALNTL5Q7Z4T8 443 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 ZGRF1Q86YA3 2104 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 TAGAPQ8N103 731 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 FAM13CQ8NE31 585 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 C17orf47Q8NEP4 570 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 NUP43Q8NFH3 380 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 FBXO30Q8TB52 745 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 BCAS4Q8TDM0 211 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 GRHL3Q8TE85 626 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 OR5P2Q8WZ92 322 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 TMEM125Q96AQ2 219 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 SPACA9Q96E40 222 aaPredicted RBP13.1□□□□□ -0.31
CTSL-201ENST00000340342 FAM120BQ96EK7 910 aaKnown RBP13.1□□□□□ -0.31
CTSL-201ENST00000340342 SCMH1Q96GD3 660 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 LCORQ96JN0 433 aaPredicted RBP13.1□□□□□ -0.31
CTSL-201ENST00000340342 C5orf34Q96MH7 638 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 BTBD9Q96Q07 612 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 TAAR6Q96RI8 345 aa13.1□□□□□ -0.31
CTSL-201ENST00000340342 GPR55Q9Y2T6 319 aaPredicted RBP13.1□□□□□ -0.31
CTSL-201ENST00000340342 NCKAP5O14513 1909 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 A0A0G2JMM0 328 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 A0A1W2PPB8 328 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 A0A1W2PRS3 328 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 FRG2CA6NGY1 282 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 KIR3DP1A8MWS1 328 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 G3V3Y1 287 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 RNASET2O00584 256 aaKnown RBP13.09□□□□□ -0.31
CTSL-201ENST00000340342 NME2P1O60361 137 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 SCN2BO60939 215 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 SLC22A3O75751 556 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 CCL3P10147 92 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 TROVE2P10155 538 aaKnown RBP eCLIP13.09□□□□□ -0.31
CTSL-201ENST00000340342 DRD5P21918 477 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 NME2P22392 152 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 S100A3P33764 101 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 NRG3P56975 720 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 FBXW4P57775 412 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 GPR85P60893 370 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 DPY19L1Q2PZI1 675 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 DESI1Q6ICB0 168 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 SLC25A25Q6KCM7 469 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 PIGWQ7Z7B1 504 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 SLC44A2Q8IWA5 706 aaPredicted RBP13.09□□□□□ -0.31
CTSL-201ENST00000340342 GPALPP1Q8IXQ4 340 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 CLEC4FQ8N1N0 589 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 MIER2Q8N344 545 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 SLC15A4Q8N697 577 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 NATD1Q8N6N6 113 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 BCORP1Q8N888 145 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 PSD4Q8NDX1 1056 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 OR10G3Q8NGC4 313 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 OR4N2Q8NGD1 307 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 OR5AK3PQ8NH89 298 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 DNAJB8Q8NHS0 232 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 GIMAP5Q96F15 307 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 OTUB1Q96FW1 271 aaPredicted RBP13.09□□□□□ -0.31
CTSL-201ENST00000340342 RILPQ96NA2 401 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 ZBTB18Q99592 522 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 ELAC2Q9BQ52 826 aaKnown RBP13.09□□□□□ -0.31
CTSL-201ENST00000340342 TMEM120AQ9BXJ8 343 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 DEPPQ9NTK1 212 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 ZIM2Q9NZV7 527 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 NTMQ9P121 344 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 NPFFR2Q9Y5X5 522 aa13.09□□□□□ -0.31
CTSL-201ENST00000340342 FREM3P0C091 2139 aa13.08□□□□□ -0.32
CTSL-201ENST00000340342 NDUFAB1O14561 156 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms