RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 IFI6P09912 130 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 GNLYP22749 145 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 RFC3P40938 356 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 TMED10P49755 219 aaKnown RBP14.04□□□□□ -0.16
UBE3B-201ENST00000340074 TDGF1P3P51864 188 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 ZNF155Q12901 538 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-201ENST00000340074 MRPL49Q13405 166 aaKnown RBP14.04□□□□□ -0.16
UBE3B-201ENST00000340074 PGS1Q32NB8 556 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 SLC22A10Q63ZE4 541 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 EPGNQ6UW88 154 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 NPSR1Q6W5P4 371 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 CAMKMTQ7Z624 323 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 ACTRT2Q8TDY3 377 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 PAQR8Q8TEZ7 354 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 OMA1Q96E52 524 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 OR52B2Q96RD2 323 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 DUSP26Q9BV47 211 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 BHLHE41Q9C0J9 482 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-201ENST00000340074 AIG1Q9NVV5 245 aa14.04□□□□□ -0.16
UBE3B-201ENST00000340074 CHCHD2Q9Y6H1 151 aaPredicted RBP14.04□□□□□ -0.16
UBE3B-201ENST00000340074 PINLYPA6NC86 204 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 TO15178 435 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 ATP8B1O43520 1251 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 WISP2O76076 250 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 EDN3P14138 238 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 CNR1P21554 472 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 NME5P56597 212 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 UFM1P61960 85 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 PSG6Q00889 435 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 ALDH6A1Q02252 535 aaKnown RBP14.03□□□□□ -0.16
UBE3B-201ENST00000340074 RPS6KA2Q15349 733 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 RNFT1Q5M7Z0 435 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 DESI1Q6ICB0 168 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 RGS9BPQ6ZS82 235 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 SZRD1Q7Z422 152 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 WDR53Q7Z5U6 358 aaPredicted RBP14.03□□□□□ -0.16
UBE3B-201ENST00000340074 NATD1Q8N6N6 113 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 OR2M7Q8NG81 312 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 MARK4Q96L34 752 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 TEX37Q96LM6 180 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 TSPAN10Q9H1Z9 355 aaPredicted RBP14.03□□□□□ -0.16
UBE3B-201ENST00000340074 MED4Q9NPJ6 270 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 SIRT3Q9NTG7 399 aaPredicted RBP14.03□□□□□ -0.16
UBE3B-201ENST00000340074 CNIH4Q9P003 139 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 GPR45Q9Y5Y3 372 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 FLNCQ14315 2725 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 DNAJC13O75165 2243 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 ZNF407Q9C0G0 2248 aa14.03□□□□□ -0.16
UBE3B-201ENST00000340074 ANKUB1A6NFN9 424 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 TP53I11O14683 189 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 PPM1BO75688 479 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 TGDSO95455 350 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 C6orf47O95873 294 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 ABCB1P08183 1280 aaPredicted RBP14.02□□□□□ -0.16
UBE3B-201ENST00000340074 ZNF24P17028 368 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 NAGAP17050 411 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 PIGAP37287 484 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 DNASE1L1P49184 302 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 PRKAG1P54619 331 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 PLCXD2Q0VAA5 305 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 LSM12Q3MHD2 195 aaKnown RBP14.02□□□□□ -0.16
UBE3B-201ENST00000340074 PRAMEF20Q5VT98 475 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 TMEM198Q66K66 360 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 OR4F3Q6IEY1 312 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 SLC44A2Q8IWA5 706 aaPredicted RBP14.02□□□□□ -0.16
UBE3B-201ENST00000340074 SLC34A3Q8N130 599 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 FBXW8Q8N3Y1 598 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 ZFP62Q8NB50 900 aaPredicted RBP14.02□□□□□ -0.16
UBE3B-201ENST00000340074 POGLUT1Q8NBL1 392 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 ST6GALNAC3Q8NDV1 305 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 NUP43Q8NFH3 380 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 OR4N2Q8NGD1 307 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 OR8J2Q8NGG1 315 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 CEP70Q8NHQ1 597 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 OR5P2Q8WZ92 322 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 TMBIM1Q969X1 311 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 TESCQ96BS2 214 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 FAM173AQ9BQD7 235 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 CLMPQ9H6B4 373 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 C3orf14Q9HBI5 128 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 PROK2Q9HC23 129 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 EQTNQ9NQ60 294 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 NTMQ9P121 344 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 CNOT11Q9UKZ1 510 aaKnown RBP14.02□□□□□ -0.16
UBE3B-201ENST00000340074 SNX8Q9Y5X2 465 aa14.02□□□□□ -0.16
UBE3B-201ENST00000340074 COL12A1Q99715 3063 aa14.02□□□□□ -0.17
UBE3B-201ENST00000340074 HIVEP3Q5T1R4 2406 aa14.01□□□□□ -0.17
UBE3B-201ENST00000340074 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.01□□□□□ -0.17
UBE3B-201ENST00000340074 CFLARO15519 480 aa14.01□□□□□ -0.17
UBE3B-201ENST00000340074 EMC8O43402 210 aa14.01□□□□□ -0.17
UBE3B-201ENST00000340074 KIR3DL1P43629 444 aa14.01□□□□□ -0.17
UBE3B-201ENST00000340074 IDH3AP50213 366 aa14.01□□□□□ -0.17
UBE3B-201ENST00000340074 CLNS1AP54105 237 aaKnown RBP14.01□□□□□ -0.17
UBE3B-201ENST00000340074 WNT3P56703 355 aa14.01□□□□□ -0.17
UBE3B-201ENST00000340074 HBA1P69905 142 aa14.01□□□□□ -0.17
UBE3B-201ENST00000340074 PHC1P78364 1004 aa14.01□□□□□ -0.17
UBE3B-201ENST00000340074 KCNC4Q03721 635 aa14.01□□□□□ -0.17
UBE3B-201ENST00000340074 BICRALQ6AI39 1079 aa14.01□□□□□ -0.17
UBE3B-201ENST00000340074 GK5Q6ZS86 529 aa14.01□□□□□ -0.17
UBE3B-201ENST00000340074 CLECL1Q8IZS7 167 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms