RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 DHRS4L1P0CG22 281 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 RPL7P18124 248 aaKnown RBP12.26□□□□□ -0.45
USP47-202ENST00000339865 PNCKQ6P2M8 343 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 SUSD1Q6UWL2 747 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 LRRC52Q8N7C0 313 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 SLC19A3Q9BZV2 496 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 HIPK2Q9H2X6 1198 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 LOC730098B7Z3J9 87 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 MTX2O75431 263 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 MBP02144 154 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 AOC1P19801 751 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 G0S2P27469 103 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 YBEYP58557 167 aaPredicted RBP12.26□□□□□ -0.45
USP47-202ENST00000339865 ADGRF1Q5T601 910 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 TMEM126BQ8IUX1 230 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 ZFPM1Q8IX07 1006 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 OR4E2Q8NGC2 313 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 CDCA5Q96FF9 252 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 LRRC10BA6NIK2 292 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 SNCGO76070 127 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 HOXC6P09630 235 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 ETFAP13804 333 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 F2RP25116 425 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 ARL2P36404 184 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 PPT1P50897 306 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 NDST2P52849 883 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 THOC6Q86W42 341 aaKnown RBP12.26□□□□□ -0.45
USP47-202ENST00000339865 METTL27Q8N6F8 245 aaPredicted RBP12.26□□□□□ -0.45
USP47-202ENST00000339865 ACBD7Q8N6N7 88 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 OR9K2Q8NGE7 335 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 TMEM234Q8WY98 164 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.26□□□□□ -0.45
USP47-202ENST00000339865 RHBDD3Q9Y3P4 386 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 TMEM14AQ9Y6G1 99 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 ARL2-SNX15V9GYD0 113 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 PBRM1Q86U86 1689 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 TRAF3IP2O43734 574 aaPredicted RBP12.26□□□□□ -0.45
USP47-202ENST00000339865 UGT2B7P16662 529 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 ACTR1BP42025 376 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 OR4F6Q8NGB9 312 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 TSPEARQ8WU66 669 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 SLC22A17Q8WUG5 538 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 KCNA7Q96RP8 456 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 BCO2Q9BYV7 579 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 GPN2Q9H9Y4 310 aaPredicted RBP12.26□□□□□ -0.45
USP47-202ENST00000339865 IL17RBQ9NRM6 502 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 DZANK1Q9NVP4 752 aa12.26□□□□□ -0.45
USP47-202ENST00000339865 FUOMA2VDF0 154 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 MSCO60682 206 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 OR4Q2P0C623 313 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 TGM1P22735 817 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 PCBP1Q15365 356 aaKnown RBP eCLIP12.25□□□□□ -0.45
USP47-202ENST00000339865 GDF6Q6KF10 455 aaPredicted RBP12.25□□□□□ -0.45
USP47-202ENST00000339865 BPHLQ86WA6 291 aaPredicted RBP12.25□□□□□ -0.45
USP47-202ENST00000339865 TOP6BLQ8N6T0 577 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 TXNDC15Q96J42 360 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 ZDHHC4Q9NPG8 344 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 IL36AQ9UHA7 158 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 UNC13CQ8NB66 2214 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 CHD2O14647 1828 aaKnown RBP12.25□□□□□ -0.45
USP47-202ENST00000339865 A0A087WUU8 490 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 BCAS2O75934 225 aaPredicted RBP12.25□□□□□ -0.45
USP47-202ENST00000339865 RASAL1O95294 804 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 RAB3DO95716 219 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 PNMTP11086 282 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 GCGRP47871 477 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 ABHD18Q0P651 414 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 IL1F10Q8WWZ1 152 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 NXF5Q9H1B4 397 aaKnown RBP12.25□□□□□ -0.45
USP47-202ENST00000339865 ABCA7Q8IZY2 2146 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 KIAA0556O60303 1618 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 UGGT1Q9NYU2 1555 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 H0YAE9 185 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 PIM1P11309 404 aaPredicted RBP12.25□□□□□ -0.45
USP47-202ENST00000339865 GDF5P43026 501 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 RPL13AP3Q6NVV1 102 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 RPS27LQ71UM5 84 aaKnown RBP12.25□□□□□ -0.45
USP47-202ENST00000339865 FAM185AQ8N0U4 392 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 OR8U1Q8NH10 309 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 FAM46AQ96IP4 442 aaKnown RBP12.25□□□□□ -0.45
USP47-202ENST00000339865 OR51E2Q9H255 320 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 GJD2Q9UKL4 321 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 SAMD9LQ8IVG5 1584 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 CD300LBA8K4G0 201 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 WNT9AO14904 365 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 UPK1BO75841 260 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 SEC14L2O76054 403 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 BRICD5Q6PL45 260 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 ZNF610Q8N9Z0 462 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 CNN2Q99439 309 aaKnown RBP12.25□□□□□ -0.45
USP47-202ENST00000339865 MAGEH1Q9H213 219 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 ADAMTS10Q9H324 1103 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 PXDNLA1KZ92 1463 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 DDTLA6NHG4 134 aaPredicted RBP12.25□□□□□ -0.45
USP47-202ENST00000339865 THBS3P49746 956 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 OAZ1P54368 228 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 TAF9Q16594 264 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 CNIH2Q6PI25 160 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 TMIGD1Q6UXZ0 262 aa12.25□□□□□ -0.45
USP47-202ENST00000339865 LIX1LQ8IVB5 337 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms