RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 CPNE4Q96A23 557 aaPredicted RBP9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 ZFP3Q96NJ6 502 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 OR52E6Q96RD3 313 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 FZD3Q9NPG1 666 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 TDP1Q9NUW8 608 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 RPS6KB2Q9UBS0 482 aa9.14□□□□□ -0.95
PTCHD4-201ENST00000339488 NRXN2Q9P2S2 1712 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 MYLKQ15746 1914 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 LOXHD1Q8IVV2 1947 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 A0A087X0M5 115 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 LOC285095A0A1B0GVY8 99 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 A0A1B0GX30 115 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 J3KTA2 159 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 TNFRSF11BO00300 401 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 TLR5O60602 858 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 LILRB5O75023 590 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 STX11O75558 287 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 KLHL18O94889 574 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 C6orf47O95873 294 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 LGI1O95970 557 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 S1PR4O95977 384 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 WNT1P04628 370 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 ANXA2P07355 339 aaKnown RBP9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 HSD3B1P14060 373 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 ANXA7P20073 488 aaKnown RBP9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 GJA5P36382 358 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 SPAM1P38567 509 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 HMGCS1Q01581 520 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 PTGES3Q15185 160 aaKnown RBP9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 SURF2Q15527 256 aaPredicted RBP9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 C9orf131Q5VYM1 1079 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 REC114Q7Z4M0 266 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 SLC30A8Q8IWU4 369 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 FBXO39Q8N4B4 442 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 CAMKVQ8NCB2 501 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 PPHLN1Q8NEY8 458 aaKnown RBP9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 OR52B4Q8NGK2 314 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 KAT2AQ92830 837 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 SCLYQ96I15 445 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 MINDY3Q9H8M7 445 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 SARS2Q9NP81 518 aaKnown RBP9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 RHCGQ9UBD6 479 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 POLLQ9UGP5 575 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 NUBP2Q9Y5Y2 271 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 TMEM218A2RU14 115 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 LRATO95237 230 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 HOXC4P09017 264 aaPredicted RBP9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 ZNF865P0CJ78 1059 aaPredicted RBP9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 PRSS56P0CW18 603 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 ELNP15502 786 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 PPP3CBP16298 524 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 ABCD3P28288 659 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 GNALP38405 381 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 RAD52P43351 418 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 DGCR2P98153 550 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 PPIGQ13427 754 aaKnown RBP eCLIP9.13□□□□□ -0.952e-6■■□□□ 14.1
PTCHD4-201ENST00000339488 CCDC157Q569K6 752 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 BEX5Q5H9J7 111 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 FAAP20Q6NZ36 180 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 CLEC2AQ6UVW9 174 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 TMEM192Q8IY95 271 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 IZUMO1Q8IYV9 350 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 LGI4Q8N135 537 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 LRRC18Q8N456 261 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 OR5T3Q8NGG3 340 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 OR10J5Q8NHC4 309 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 SPPL2AQ8TCT8 520 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 ACOT11Q8WXI4 607 aaPredicted RBP9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 MYLIPQ8WY64 445 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 TMEM176AQ96HP8 235 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 ZFP42Q96MM3 310 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 PBX4Q9BYU1 374 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 MRPL37Q9BZE1 423 aaKnown RBP9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 RNF32Q9H0A6 362 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 PRDM13Q9H4Q3 707 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 XKR8Q9H6D3 395 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 MBD1Q9UIS9 605 aaPredicted RBP9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 ZMYM5Q9UJ78 669 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 ASF1AQ9Y294 204 aa9.13□□□□□ -0.95
PTCHD4-201ENST00000339488 CARNS1A5YM72 827 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 MARCH11A6NNE9 402 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 COLCA2A8K830 154 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 ANHXE9PGG2 379 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 TSPAN3O60637 253 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 FMO6PO60774 539 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 APBB3O95704 486 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 FGF19O95750 216 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 TXNP10599 105 aaKnown RBP9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 AHCYP23526 432 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 AKAP5P24588 427 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 GJA4P35212 333 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 ETV5P41161 510 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 CRKP46108 304 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 SEC61A1P61619 476 aaKnown RBP9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 HTRA4P83105 476 aaPredicted RBP9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 ZNF155Q12901 538 aaPredicted RBP9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 BOP1Q14137 746 aaKnown RBP9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 GAMTQ14353 236 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 PEA15Q15121 130 aa9.12□□□□□ -0.95
PTCHD4-201ENST00000339488 SLC10A6Q3KNW5 377 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms