RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 CHI3L1P36222 383 aaPredicted RBP11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 ZFP36L2P47974 494 aaKnown RBP11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 TMED10P49755 219 aaKnown RBP11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 KLF10Q13118 480 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 TUBA3CQ13748 450 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 RCAN2Q14206 197 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 TLR1Q15399 786 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 CYP27C1Q4G0S4 372 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 C6orf10Q5SRN2 563 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 GKAP1Q5VSY0 366 aaPredicted RBP11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 TUBA3EQ6PEY2 450 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 IL20RBQ6UXL0 311 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 MTERF4Q7Z6M4 381 aaKnown RBP11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 MTDHQ86UE4 582 aaKnown RBP11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 SLC44A2Q8IWA5 706 aaPredicted RBP11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 ZNF441Q8N8Z8 693 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 DNAJB8Q8NHS0 232 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 GPR151Q8TDV0 419 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 SLC9A6Q92581 669 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 TMEM125Q96AQ2 219 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 SGCZQ96LD1 299 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 BTBD9Q96Q07 612 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 INPP5KQ9BT40 448 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 ACTRT3Q9BYD9 372 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 NXF5Q9H1B4 397 aaKnown RBP11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 TRIM45Q9H8W5 580 aaPredicted RBP11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 Q9N2J8 555 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 EQTNQ9NQ60 294 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 HPF1Q9NWY4 346 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 LEF1Q9UJU2 399 aaPredicted RBP11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 PCDHGB3Q9Y5G1 929 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 NPFFR2Q9Y5X5 522 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 CAPN7Q9Y6W3 813 aa11.01□□□□□ -0.65
SPTLC1-202ENST00000337841 TRAV17A0A0B4J275 112 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 RNF103-CHMP3A0A140T963 221 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 DUXAA6NLW8 204 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 TP53I11O14683 189 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 TO15178 435 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 NME6O75414 186 aaPredicted RBP11□□□□□ -0.65
SPTLC1-202ENST00000337841 REM1O75628 298 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 OR6B1O95007 311 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 KRT75O95678 551 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 F10P00742 488 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 HMGN2P05204 90 aaKnown RBP11□□□□□ -0.65
SPTLC1-202ENST00000337841 GSNP06396 782 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 ZCCHC18P0CG32 403 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 CT45A8P0DMV1 189 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 CT45A9P0DMV2 189 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 MATN1P21941 496 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 SOX3P41225 446 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 TNFSF10P50591 281 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 ANXA11P50995 505 aaKnown RBP11□□□□□ -0.65
SPTLC1-202ENST00000337841 RPP38P78345 283 aaKnown RBP11□□□□□ -0.65
SPTLC1-202ENST00000337841 MRPS22P82650 360 aaKnown RBP11□□□□□ -0.65
SPTLC1-202ENST00000337841 KLRB1Q12918 225 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 STX5Q13190 355 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 GAB1Q13480 694 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 UBAP2LQ14157 1087 aaKnown RBP11□□□□□ -0.65
SPTLC1-202ENST00000337841 OR1C1Q15619 314 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 CT45A2Q5DJT8 189 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 SLC25A25Q6KCM7 469 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 MFSD12Q6NUT3 480 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 SLC2A7Q6PXP3 512 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 PCSK4Q6UW60 755 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 NUP54Q7Z3B4 507 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 SLC34A3Q8N130 599 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 CYP4Z2PQ8N1L4 340 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 RBMXL3Q8N7X1 1067 aaKnown RBP11□□□□□ -0.65
SPTLC1-202ENST00000337841 CATSPER1Q8NEC5 780 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 OR5AK3PQ8NH89 298 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 ADAMTS15Q8TE58 950 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 GTF2H4Q92759 462 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 C16orf58Q96GQ5 468 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 C5orf34Q96MH7 638 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 SLC35A5Q9BS91 424 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 LMF2Q9BU23 707 aaKnown RBP11□□□□□ -0.65
SPTLC1-202ENST00000337841 NMUR2Q9GZQ4 415 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 TIMMDC1Q9NPL8 285 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 GIN1Q9NXP7 522 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 ANKRD10Q9NXR5 420 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 B3GNT3Q9Y2A9 372 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 DTX4Q9Y2E6 619 aa11□□□□□ -0.65
SPTLC1-202ENST00000337841 PKD1L2Q7Z442 2459 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 A0A096LPI6 279 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 LOC100653049A0A140TA62 436 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 EIF4E1BA6NMX2 242 aaKnown RBP10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 DCTN3O75935 186 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 KRT34O76011 436 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 NKX2-2O95096 273 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 KCNH1O95259 989 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 NADKO95544 446 aaPredicted RBP10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 AGR2O95994 175 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 FBXO45P0C2W1 286 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 CAPN3P20807 821 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 ABCD3P28288 659 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 MAGEA8P43361 318 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 PSMD4P55036 377 aaKnown RBP10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 CORO7P57737 925 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 TXNL4AP83876 142 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms