RNA–Protein interactions for RNA: ENST00000336873.9

HPS4-201, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HPS4, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-201ENST00000336873 SIPA1Q96FS4 1042 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 KCTD7Q96MP8 289 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 LRRC3BQ96PB8 259 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 INSM2Q96T92 566 aaPredicted RBP7.77□□□□□ -1.16
HPS4-201ENST00000336873 GPR174Q9BXC1 333 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 MMP27Q9H306 513 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 TP63Q9H3D4 680 aaPredicted RBP7.77□□□□□ -1.16
HPS4-201ENST00000336873 GPN2Q9H9Y4 310 aaPredicted RBP7.77□□□□□ -1.16
HPS4-201ENST00000336873 SLC28A3Q9HAS3 691 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 SLC35C2Q9NQQ7 365 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 NANSQ9NR45 359 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 ENOPH1Q9UHY7 261 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 IKZF2Q9UKS7 526 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 SLC27A6Q9Y2P4 619 aa7.77□□□□□ -1.16
HPS4-201ENST00000336873 NARSO43776 548 aaKnown RBP7.77□□□□□ -1.17
HPS4-201ENST00000336873 SEMA3DO95025 777 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 APODP05090 189 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 DRD5P21918 477 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 APEX1P27695 318 aaKnown RBP7.77□□□□□ -1.17
HPS4-201ENST00000336873 PYCR1P32322 319 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 PRLHRP49683 370 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 SLC7A9P82251 487 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 ZNF91Q05481 1191 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 KRR1Q13601 381 aaKnown RBP7.77□□□□□ -1.17
HPS4-201ENST00000336873 SEC23BQ15437 767 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 SMU1Q2TAY7 513 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 WSCD2Q2TBF2 565 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 AMZ1Q400G9 498 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 HENMT1Q5T8I9 393 aaKnown RBP7.77□□□□□ -1.17
HPS4-201ENST00000336873 BHLHB9Q6PI77 547 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 SERPINA12Q8IW75 414 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 ALDH16A1Q8IZ83 802 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 ACOT4Q8N9L9 421 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 DNAJB8Q8NHS0 232 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 PIGXQ8TBF5 258 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 TRIM43Q96BQ3 446 aaPredicted RBP7.77□□□□□ -1.17
HPS4-201ENST00000336873 SAMD8Q96LT4 415 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 NELL2Q99435 816 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 WFDC6Q9BQY6 131 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 TMEM246Q9BRR3 403 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 NECTIN3Q9NQS3 549 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 SERGEFQ9UGK8 458 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 MKL2Q9ULH7 1088 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 KCNE3Q9Y6H6 103 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 SPACA6W5XKT8 324 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 A0A1W2PQ09 198 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 ANKRD61A6NGH8 418 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 AGAP5A6NIR3 686 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 DOK2O60496 412 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 IFNGR2P38484 337 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 P2RY2P41231 377 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 LIM2P55344 173 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 VSX2P58304 361 aaPredicted RBP7.77□□□□□ -1.17
HPS4-201ENST00000336873 RACK1P63244 317 aaKnown RBP7.77□□□□□ -1.17
HPS4-201ENST00000336873 RGS1Q08116 209 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 VEZF1Q14119 521 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 FAM78AQ5JUQ0 283 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 FAM109BQ6ICB4 259 aaPredicted RBP7.77□□□□□ -1.17
HPS4-201ENST00000336873 ACSM5Q6NUN0 579 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 SLC16A11Q8NCK7 471 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 THAP3Q8WTV1 239 aaPredicted RBP7.77□□□□□ -1.17
HPS4-201ENST00000336873 ORAI1Q96D31 301 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 RBM18Q96H35 190 aaKnown RBP7.77□□□□□ -1.17
HPS4-201ENST00000336873 NEURL2Q9BR09 285 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 SPATA5L1Q9BVQ7 753 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 ACER3Q9NUN7 267 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 SPHK1Q9NYA1 384 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 MYEF2Q9P2K5 600 aaKnown RBP7.77□□□□□ -1.17
HPS4-201ENST00000336873 TNFRSF10DQ9UBN6 386 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 UGT2A1Q9Y4X1 527 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 DOCK9Q9BZ29 2069 aa7.77□□□□□ -1.17
HPS4-201ENST00000336873 LOC102723532A0A0G2JNH3 316 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 EDDM13A0A1B0GTR0 161 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 OR6C74A6NCV1 312 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 SLC16A6O15403 523 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 HRO43593 1189 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 SSNA1O43805 119 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 PRKYO43930 277 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 SLCO2B1O94956 709 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 MMP12P39900 470 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 CDK3Q00526 305 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 HNRNPA1L2Q32P51 320 aaKnown RBP7.76□□□□□ -1.17
HPS4-201ENST00000336873 LRIF1Q5T3J3 769 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 OR4C11Q6IEV9 310 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 SLC27A4Q6P1M0 643 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 FAM111BQ6SJ93 734 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 LNX2Q8N448 690 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 LINC00471Q8N535 108 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 SAMD12Q8N8I0 201 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 GALNT6Q8NCL4 622 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 OR6C4Q8NGE1 309 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 WDR20Q8TBZ3 569 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 SNX33Q8WV41 574 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 UFD1Q92890 307 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 POP5Q969H6 163 aaKnown RBP7.76□□□□□ -1.17
HPS4-201ENST00000336873 OTUB2Q96DC9 234 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 DUS3LQ96G46 650 aaKnown RBP7.76□□□□□ -1.17
HPS4-201ENST00000336873 HRASLS5Q96KN8 279 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 CCDC115Q96NT0 180 aa7.76□□□□□ -1.17
HPS4-201ENST00000336873 RPP25Q9BUL9 199 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms