RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 GABARAPL1Q9H0R8 117 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 TMEM245Q9H330 911 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 FZD3Q9NPG1 666 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 IMP3Q9NV31 184 aaKnown RBP13.11□□□□□ -0.31
SF1-202ENST00000334944 MS4A12Q9NXJ0 267 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 REV1Q9UBZ9 1251 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 MGAT4AQ9UM21 535 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 PCDHGB3Q9Y5G1 929 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 U3KQ87 197 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 A0A1W2PQL4 384 aaPredicted RBP13.11□□□□□ -0.31
SF1-202ENST00000334944 OR52A4PA6NMU1 304 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 HNRNPCL2B2RXH8 293 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 PLOD3O60568 738 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 PPM1BO75688 479 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 NFATC1O95644 943 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 BCHEP06276 602 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 EN2P19622 333 aaPredicted RBP13.11□□□□□ -0.31
SF1-202ENST00000334944 KELP23276 732 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 LARS2Q15031 903 aaKnown RBP13.11□□□□□ -0.31
SF1-202ENST00000334944 LEXMQ3ZCV2 418 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 FRMPD2BQ6IN97 320 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 FAHD1Q6P587 224 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 CEACAM20Q6UY09 585 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 SP7Q8TDD2 431 aaPredicted RBP13.11□□□□□ -0.31
SF1-202ENST00000334944 QRFPRQ96P65 431 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 WFDC6Q9BQY6 131 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 RSPO3Q9BXY4 272 aaPredicted RBP13.11□□□□□ -0.31
SF1-202ENST00000334944 SAV1Q9H4B6 383 aaPredicted RBP13.11□□□□□ -0.31
SF1-202ENST00000334944 NIPAL2Q9H841 368 aa13.11□□□□□ -0.31
SF1-202ENST00000334944 TEX10Q9NXF1 929 aaPredicted RBP13.11□□□□□ -0.31
SF1-202ENST00000334944 FAM240BA0A1B0GVZ2 78 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 A0A1W2PP55 124 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 GTPBP1O00178 669 aaKnown RBP13.1□□□□□ -0.31
SF1-202ENST00000334944 OR1F1O43749 312 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 TPST2O60704 377 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 PROS1P07225 676 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 PSPHP78330 225 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 CDK3Q00526 305 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 ASAH1Q13510 395 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 GNA13Q14344 377 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 IFI44LQ53G44 452 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 SLC9B2Q86UD5 537 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 ATCAYQ86WG3 371 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 C17orf64Q86WR6 236 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 SLC34A3Q8N130 599 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 TMIEQ8NEW7 156 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 B3GNT7Q8NFL0 401 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 OR52N2Q8NGI0 321 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 CEP76Q8TAP6 659 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 ZNF431Q8TF32 576 aaPredicted RBP13.1□□□□□ -0.31
SF1-202ENST00000334944 ST8SIA4Q92187 359 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 RACGAP1Q9H0H5 632 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 MIXL1Q9H2W2 232 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 SCPEP1Q9HB40 452 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 DIMT1Q9UNQ2 313 aaKnown RBP13.1□□□□□ -0.31
SF1-202ENST00000334944 HSPE1-MOB4S4R3N1 261 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 FOXE1O00358 373 aaPredicted RBP13.1□□□□□ -0.31
SF1-202ENST00000334944 PI15O43692 258 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 LCMT2O60294 686 aaKnown RBP13.1□□□□□ -0.31
SF1-202ENST00000334944 CDRT1O95170 752 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 HRGP04196 525 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 IGFBP1P08833 259 aaPredicted RBP13.1□□□□□ -0.31
SF1-202ENST00000334944 MANFP55145 182 aaKnown RBP13.1□□□□□ -0.31
SF1-202ENST00000334944 C21orf58P58505 322 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 RUNX1T1Q06455 604 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 MAB21L1Q13394 359 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 LRRC32Q14392 662 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 CAMKMTQ7Z624 323 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 PDZD3Q86UT5 571 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 RBM45Q8IUH3 476 aaKnown RBP13.1□□□□□ -0.31
SF1-202ENST00000334944 PGBD3Q8N328 593 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 HORMAD2Q8N7B1 307 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 GANCQ8TET4 914 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 SMARCD2Q92925 531 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 PPP1R16AQ96I34 528 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 COL21A1Q96P44 957 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 KXD1Q9BQD3 176 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 UQCC2Q9BRT2 126 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 YIPF4Q9BSR8 244 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 KLHL21Q9UJP4 597 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 CMAHPQ9Y471 501 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 SCN3AQ9NY46 2000 aa13.1□□□□□ -0.31
SF1-202ENST00000334944 SNRNP200O75643 2136 aaKnown RBP13.1□□□□□ -0.31
SF1-202ENST00000334944 TRBC2A0A5B9 178 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 LINC00862A6NCI5 91 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 MYL12BO14950 172 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 MYL12AP19105 171 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 DRD3P35462 400 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 FEN1P39748 380 aaKnown RBP13.09□□□□□ -0.31
SF1-202ENST00000334944 AKR1D1P51857 326 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 TAS2R38P59533 333 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 PIP5KL1Q5T9C9 394 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 ZNF605Q86T29 641 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 FAM129CQ86XR2 697 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 LINC00052Q96N35 136 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 USB1Q9BQ65 265 aaKnown RBP13.09□□□□□ -0.31
SF1-202ENST00000334944 PLA2G2FQ9BZM2 168 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 EPHX3Q9H6B9 360 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 CTPS2Q9NRF8 586 aa13.09□□□□□ -0.31
SF1-202ENST00000334944 CLEC2DQ9UHP7 191 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms