RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 CDC73Q6P1J9 531 aa19.98■□□□□ 0.79
TPM1-204ENST00000334895 RNF111Q6ZNA4 994 aa19.98■□□□□ 0.79
TPM1-204ENST00000334895 ZZZ3Q8IYH5 903 aa19.98■□□□□ 0.79
TPM1-204ENST00000334895 LGI4Q8N135 537 aa19.98■□□□□ 0.79
TPM1-204ENST00000334895 MAL2Q969L2 176 aa19.98■□□□□ 0.79
TPM1-204ENST00000334895 KIAA1143Q96AT1 154 aaPredicted RBP19.98■□□□□ 0.79
TPM1-204ENST00000334895 OR7D2Q96RA2 312 aa19.98■□□□□ 0.79
TPM1-204ENST00000334895 FAF1Q9UNN5 650 aaPredicted RBP19.98■□□□□ 0.79
TPM1-204ENST00000334895 PRAMEF27A3QJZ7 478 aa19.97■□□□□ 0.79
TPM1-204ENST00000334895 FAM220BPB1ANY3 271 aa19.97■□□□□ 0.79
TPM1-204ENST00000334895 NQO1P15559 274 aaKnown RBP19.97■□□□□ 0.79
TPM1-204ENST00000334895 PRIM2P49643 509 aa19.97■□□□□ 0.79
TPM1-204ENST00000334895 KHKP50053 298 aa19.97■□□□□ 0.79
TPM1-204ENST00000334895 DSTNP60981 165 aa19.97■□□□□ 0.79
TPM1-204ENST00000334895 ZNF155Q12901 538 aaPredicted RBP19.97■□□□□ 0.79
TPM1-204ENST00000334895 DUSP5Q16690 384 aa19.97■□□□□ 0.79
TPM1-204ENST00000334895 CYP51A1Q16850 503 aa19.97■□□□□ 0.79
TPM1-204ENST00000334895 SPATS1Q496A3 300 aa19.97■□□□□ 0.79
TPM1-204ENST00000334895 MRGPREQ86SM8 312 aa19.97■□□□□ 0.79
TPM1-204ENST00000334895 C9orf40Q8IXQ3 194 aa19.97■□□□□ 0.79
TPM1-204ENST00000334895 CDRT4Q8N9R6 151 aa19.97■□□□□ 0.79
TPM1-204ENST00000334895 ZSCAN1Q8NBB4 408 aa19.97■□□□□ 0.79
TPM1-204ENST00000334895 OR2T12Q8NG77 320 aa19.97■□□□□ 0.79
TPM1-204ENST00000334895 JADE3Q92613 823 aa19.97■□□□□ 0.79
TPM1-204ENST00000334895 NACC2Q96BF6 587 aa19.97■□□□□ 0.79
TPM1-204ENST00000334895 CCDC124Q96CT7 223 aaKnown RBP19.97■□□□□ 0.79
TPM1-204ENST00000334895 REXO5Q96IC2 774 aaKnown RBP19.97■□□□□ 0.79
TPM1-204ENST00000334895 KCTD14Q9BQ13 255 aaPredicted RBP19.97■□□□□ 0.79
TPM1-204ENST00000334895 LMF2Q9BU23 707 aaKnown RBP19.97■□□□□ 0.79
TPM1-204ENST00000334895 ITPAQ9BY32 194 aa19.97■□□□□ 0.79
TPM1-204ENST00000334895 ACACBO00763 2458 aa19.96■□□□□ 0.79
TPM1-204ENST00000334895 MASP2O00187 686 aa19.96■□□□□ 0.79
TPM1-204ENST00000334895 TLX3O43711 291 aaPredicted RBP19.96■□□□□ 0.79
TPM1-204ENST00000334895 DNAJA2O60884 412 aa19.96■□□□□ 0.79
TPM1-204ENST00000334895 CAPNS1P04632 268 aa19.96■□□□□ 0.79
TPM1-204ENST00000334895 ME2P23368 584 aa19.96■□□□□ 0.79
TPM1-204ENST00000334895 MAGEA8P43361 318 aa19.96■□□□□ 0.79
TPM1-204ENST00000334895 CORO7P57737 925 aa19.96■□□□□ 0.79
TPM1-204ENST00000334895 PSG6Q00889 435 aa19.96■□□□□ 0.79
TPM1-204ENST00000334895 FUT5Q11128 374 aa19.96■□□□□ 0.79
TPM1-204ENST00000334895 MAPK11Q15759 364 aa19.96■□□□□ 0.79
TPM1-204ENST00000334895 FXNQ16595 210 aa19.96■□□□□ 0.79
TPM1-204ENST00000334895 GCNT6Q5T4J0 391 aa19.96■□□□□ 0.79
TPM1-204ENST00000334895 ZCCHC12Q6PEW1 402 aa19.96■□□□□ 0.79
TPM1-204ENST00000334895 NPSR1Q6W5P4 371 aa19.96■□□□□ 0.79
TPM1-204ENST00000334895 NDUFAF7Q7L592 441 aa19.96■□□□□ 0.79
TPM1-204ENST00000334895 SLC35A4Q96G79 324 aa19.96■□□□□ 0.79
TPM1-204ENST00000334895 COPS7AQ9UBW8 275 aa19.96■□□□□ 0.79
TPM1-204ENST00000334895 MAP1BP46821 2468 aaKnown RBP19.96■□□□□ 0.79
TPM1-204ENST00000334895 PRKNO60260 465 aaPredicted RBP19.95■□□□□ 0.78
TPM1-204ENST00000334895 CELA2AP08217 269 aa19.95■□□□□ 0.78
TPM1-204ENST00000334895 WT1P19544 449 aaPredicted RBP19.95■□□□□ 0.78
TPM1-204ENST00000334895 MS4A2Q01362 244 aa19.95■□□□□ 0.78
TPM1-204ENST00000334895 EBPQ15125 230 aaKnown RBP19.95■□□□□ 0.78
TPM1-204ENST00000334895 SLC9A6Q92581 669 aa19.95■□□□□ 0.78
TPM1-204ENST00000334895 VMP1Q96GC9 406 aa19.95■□□□□ 0.78
TPM1-204ENST00000334895 PCDHAC1Q9H158 963 aa19.95■□□□□ 0.78
TPM1-204ENST00000334895 TMEM38AQ9H6F2 299 aa19.95■□□□□ 0.78
TPM1-204ENST00000334895 P4HTMQ9NXG6 502 aa19.95■□□□□ 0.78
TPM1-204ENST00000334895 DKK4Q9UBT3 224 aa19.95■□□□□ 0.78
TPM1-204ENST00000334895 PRODH2Q9UF12 536 aa19.95■□□□□ 0.78
TPM1-204ENST00000334895 FBXL4Q9UKA2 621 aa19.95■□□□□ 0.78
TPM1-204ENST00000334895 URB1O60287 2271 aaKnown RBP19.95■□□□□ 0.78
TPM1-204ENST00000334895 ASNA1O43681 348 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 NKX2-2O95096 273 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 CT45A8P0DMV1 189 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 CT45A9P0DMV2 189 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 HTR1EP28566 365 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 MYBPC3Q14896 1274 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 CT45A2Q5DJT8 189 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 MICU2Q8IYU8 434 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 ADAMTS15Q8TE58 950 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 XAGE5Q8WWM1 108 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 CDS1Q92903 461 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 FGF11Q92914 225 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 ADIPOR1Q96A54 375 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 SPATA9Q9BWV2 254 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 PIGUQ9H490 435 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 ZNF160Q9HCG1 818 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 A4GALTQ9NPC4 353 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 SUCOQ9UBS9 1254 aaKnown RBP19.94■□□□□ 0.78
TPM1-204ENST00000334895 EGFL7Q9UHF1 273 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 DMXL2Q8TDJ6 3036 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 NSG1A0A0A6YYJ2 146 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 ELOVL7A1L3X0 281 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 CFAP73A6NFT4 308 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 ALOX5P09917 674 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 TFPTP0C1Z6 253 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 ARAFP10398 606 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 TXNL4AP83876 142 aaKnown RBP19.94■□□□□ 0.78
TPM1-204ENST00000334895 ATP1A4Q13733 1029 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 VMACQ2NL98 169 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 PLAG1Q6DJT9 500 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 PTRH1Q86Y79 214 aaKnown RBP19.94■□□□□ 0.78
TPM1-204ENST00000334895 RAB43Q86YS6 212 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 ELP5Q8TE02 316 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 ZCCHC14Q8WYQ9 949 aaKnown RBP19.94■□□□□ 0.78
TPM1-204ENST00000334895 PIK3R3Q92569 461 aa19.94■□□□□ 0.78
TPM1-204ENST00000334895 NAF1Q96HR8 494 aaKnown RBP19.94■□□□□ 0.78
TPM1-204ENST00000334895 BTBD9Q96Q07 612 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms