RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 OLIG3Q7RTU3 272 aa21.69■■□□□ 1.06
TSEN54-201ENST00000333213 SLC44A2Q8IWA5 706 aaPredicted RBP21.69■■□□□ 1.06
TSEN54-201ENST00000333213 LGI4Q8N135 537 aa21.69■■□□□ 1.06
TSEN54-201ENST00000333213 METTL25Q8N6Q8 603 aa21.69■■□□□ 1.06
TSEN54-201ENST00000333213 ACTRT3Q9BYD9 372 aa21.69■■□□□ 1.06
TSEN54-201ENST00000333213 ARMC1Q9NVT9 282 aa21.69■■□□□ 1.06
TSEN54-201ENST00000333213 B3GALT1Q9Y5Z6 326 aa21.69■■□□□ 1.06
TSEN54-201ENST00000333213 PROB1E7EW31 1015 aa21.68■■□□□ 1.06
TSEN54-201ENST00000333213 CSO75390 466 aaKnown RBP21.68■■□□□ 1.06
TSEN54-201ENST00000333213 MT-CO3P00414 261 aa21.68■■□□□ 1.06
TSEN54-201ENST00000333213 ZGLP1P0C6A0 271 aa21.68■■□□□ 1.06
TSEN54-201ENST00000333213 PSMA4P25789 261 aaKnown RBP21.68■■□□□ 1.06
TSEN54-201ENST00000333213 SERTAD2Q14140 314 aa21.68■■□□□ 1.06
TSEN54-201ENST00000333213 RPS26P11Q5JNZ5 115 aaPredicted RBP21.68■■□□□ 1.06
TSEN54-201ENST00000333213 EXOSC6Q5RKV6 272 aaKnown RBP21.68■■□□□ 1.06
TSEN54-201ENST00000333213 C6orf52Q5T4I8 152 aa21.68■■□□□ 1.06
TSEN54-201ENST00000333213 RAB11FIP2Q7L804 512 aa21.68■■□□□ 1.06
TSEN54-201ENST00000333213 ASCL5Q7RTU5 278 aa21.68■■□□□ 1.06
TSEN54-201ENST00000333213 TMEM19Q96HH6 336 aa21.68■■□□□ 1.06
TSEN54-201ENST00000333213 RSPO3Q9BXY4 272 aaPredicted RBP21.68■■□□□ 1.06
TSEN54-201ENST00000333213 OLAHQ9NV23 265 aa21.68■■□□□ 1.06
TSEN54-201ENST00000333213 ANAPC2Q9UJX6 822 aa21.68■■□□□ 1.06
TSEN54-201ENST00000333213 MKL2Q9ULH7 1088 aa21.68■■□□□ 1.06
TSEN54-201ENST00000333213 RIF1Q5UIP0 2472 aaKnown RBP21.68■■□□□ 1.06
TSEN54-201ENST00000333213 IFI6P09912 130 aa21.68■■□□□ 1.06
TSEN54-201ENST00000333213 UMPSP11172 480 aa21.68■■□□□ 1.06
TSEN54-201ENST00000333213 ETS2P15036 469 aa21.68■■□□□ 1.06
TSEN54-201ENST00000333213 SSTR4P31391 388 aa21.68■■□□□ 1.06
TSEN54-201ENST00000333213 KHKP50053 298 aa21.68■■□□□ 1.06
TSEN54-201ENST00000333213 PAPD5Q8NDF8 572 aaKnown RBP21.68■■□□□ 1.06
TSEN54-201ENST00000333213 OR52R1Q8NGF1 315 aa21.68■■□□□ 1.06
TSEN54-201ENST00000333213 PTPMT1Q8WUK0 201 aaPredicted RBP21.68■■□□□ 1.06
TSEN54-201ENST00000333213 SLC35A4Q96G79 324 aa21.68■■□□□ 1.06
TSEN54-201ENST00000333213 RUBCNLQ9H714 662 aa21.68■■□□□ 1.06
TSEN54-201ENST00000333213 TEX51A0A1B0GUA7 166 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 TCRBV16S1A1N1A0A5B0 115 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 TIPRLO75663 272 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 MT-ND1P03886 318 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 IFNA16P05015 189 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 TBCELQ5QJ74 424 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 CDC73Q6P1J9 531 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 CCDC80Q76M96 950 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 OVCH1Q7RTY7 1134 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 CARM1Q86X55 608 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 PACRGLQ8N7B6 248 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 ANKFN1Q8N957 763 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 LRTOMTQ8WZ04 291 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 MESP1Q9BRJ9 268 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 STRADBQ9C0K7 418 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 VSTM2BA6NLU5 285 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 TPST1O60507 370 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 FOXD2O60548 495 aaPredicted RBP21.67■■□□□ 1.06
TSEN54-201ENST00000333213 DKK1O94907 266 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 ACP2P11117 423 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 MAP3K8P41279 467 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 MAGEA8P43361 318 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 TUBA4AP68366 448 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 ZNF267Q14586 743 aaPredicted RBP21.67■■□□□ 1.06
TSEN54-201ENST00000333213 HES3Q5TGS1 186 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 REEP3Q6NUK4 255 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 FAM199XQ6PEV8 388 aaPredicted RBP21.67■■□□□ 1.06
TSEN54-201ENST00000333213 CBLL1Q75N03 491 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 TAMM41Q96BW9 452 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 NMD3Q96D46 503 aaKnown RBP21.67■■□□□ 1.06
TSEN54-201ENST00000333213 LIN37Q96GY3 246 aaPredicted RBP21.67■■□□□ 1.06
TSEN54-201ENST00000333213 MPP4Q96JB8 637 aa21.67■■□□□ 1.06
TSEN54-201ENST00000333213 CCDC88CQ9P219 2028 aa21.66■■□□□ 1.06
TSEN54-201ENST00000333213 M0QX08 132 aa21.66■■□□□ 1.06
TSEN54-201ENST00000333213 OPN1SWP03999 348 aa21.66■■□□□ 1.06
TSEN54-201ENST00000333213 CLPSP04118 112 aa21.66■■□□□ 1.06
TSEN54-201ENST00000333213 ZNF23P17027 643 aa21.66■■□□□ 1.06
TSEN54-201ENST00000333213 EMDP50402 254 aa21.66■■□□□ 1.06
TSEN54-201ENST00000333213 PGDP52209 483 aa21.66■■□□□ 1.06
TSEN54-201ENST00000333213 NSDHLQ15738 373 aa21.66■■□□□ 1.06
TSEN54-201ENST00000333213 DUSP5Q16690 384 aa21.66■■□□□ 1.06
TSEN54-201ENST00000333213 HMBOX1Q6NT76 420 aa21.66■■□□□ 1.06
TSEN54-201ENST00000333213 VTCN1Q7Z7D3 282 aa21.66■■□□□ 1.06
TSEN54-201ENST00000333213 GALNT4Q8N4A0 578 aa21.66■■□□□ 1.06
TSEN54-201ENST00000333213 AMER2Q8N7J2 671 aa21.66■■□□□ 1.06
TSEN54-201ENST00000333213 SLC9A6Q92581 669 aa21.66■■□□□ 1.06
TSEN54-201ENST00000333213 RNF145Q96MT1 663 aa21.66■■□□□ 1.06
TSEN54-201ENST00000333213 ULBP3Q9BZM4 244 aa21.66■■□□□ 1.06
TSEN54-201ENST00000333213 SOX17Q9H6I2 414 aaPredicted RBP21.66■■□□□ 1.06
TSEN54-201ENST00000333213 TIMMDC1Q9NPL8 285 aa21.66■■□□□ 1.06
TSEN54-201ENST00000333213 PNO1Q9NRX1 252 aaKnown RBP21.66■■□□□ 1.06
TSEN54-201ENST00000333213 AKAP7Q9P0M2 348 aaPredicted RBP21.66■■□□□ 1.06
TSEN54-201ENST00000333213 IFT80Q9P2H3 777 aaPredicted RBP21.66■■□□□ 1.06
TSEN54-201ENST00000333213 P2RX2Q9UBL9 471 aa21.66■■□□□ 1.06
TSEN54-201ENST00000333213 ERVK-19Q9WJR5 959 aa21.66■■□□□ 1.06
TSEN54-201ENST00000333213 FREM2Q5SZK8 3169 aa21.66■■□□□ 1.06
TSEN54-201ENST00000333213 SPAARA0A1B0GVQ0 90 aa21.65■■□□□ 1.06
TSEN54-201ENST00000333213 ASNA1O43681 348 aa21.65■■□□□ 1.06
TSEN54-201ENST00000333213 GALNSP34059 522 aa21.65■■□□□ 1.06
TSEN54-201ENST00000333213 MAPK10P53779 464 aa21.65■■□□□ 1.06
TSEN54-201ENST00000333213 FUT7Q11130 342 aa21.65■■□□□ 1.06
TSEN54-201ENST00000333213 CRB2Q5IJ48 1285 aa21.65■■□□□ 1.06
TSEN54-201ENST00000333213 MRPL14Q6P1L8 145 aaKnown RBP21.65■■□□□ 1.06
TSEN54-201ENST00000333213 EID3Q8N140 333 aa21.65■■□□□ 1.06
TSEN54-201ENST00000333213 PLPP5Q8NEB5 264 aa21.65■■□□□ 1.06
TSEN54-201ENST00000333213 PYURFQ96I23 114 aa21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms