RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 NT5CQ8TCD5 201 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 KAT2AQ92830 837 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 ZG16BQ96DA0 208 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 MRPL38Q96DV4 380 aaKnown RBP13.67□□□□□ -0.22
TPM3-206ENST00000330188 SIPA1Q96FS4 1042 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 ARHGDIGQ99819 225 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 PRR14Q9BWN1 585 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 C6orf106Q9H6K1 298 aaPredicted RBP13.67□□□□□ -0.22
TPM3-206ENST00000330188 POLMQ9NP87 494 aaPredicted RBP13.67□□□□□ -0.22
TPM3-206ENST00000330188 CD93Q9NPY3 652 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 GIN1Q9NXP7 522 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 MKLN1Q9UL63 735 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 A0A087WUU8 490 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 TLX2O43763 284 aaPredicted RBP13.67□□□□□ -0.22
TPM3-206ENST00000330188 GPX5O75715 221 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 UPK1BO75841 260 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 PORP16435 677 aaPredicted RBP13.67□□□□□ -0.22
TPM3-206ENST00000330188 GIPRP48546 466 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 RGS1Q08116 209 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 DNASE1L3Q13609 305 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 GINS1Q14691 196 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 INAVAQ3KP66 663 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 RNLSQ5VYX0 342 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 RD3Q7Z3Z2 195 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 KIF18BQ86Y91 864 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 SLC34A3Q8N130 599 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 FGF11Q92914 225 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 TSACCQ96A04 125 aaPredicted RBP13.67□□□□□ -0.22
TPM3-206ENST00000330188 WDR92Q96MX6 357 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 TRNT1Q96Q11 434 aaKnown RBP13.67□□□□□ -0.22
TPM3-206ENST00000330188 ACTRT3Q9BYD9 372 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 GPR55Q9Y2T6 319 aaPredicted RBP13.67□□□□□ -0.22
TPM3-206ENST00000330188 CHST2Q9Y4C5 530 aa13.67□□□□□ -0.22
TPM3-206ENST00000330188 UNC80Q8N2C7 3258 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 TRBV23OR9-2A0A075B6M9 112 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 FRS3O43559 492 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 ZIC2O95409 532 aaPredicted RBP13.66□□□□□ -0.22
TPM3-206ENST00000330188 ALOX5P09917 674 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 EFNB1P98172 346 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 SYT14P1Q58G82 188 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 SLC25A30Q5SVS4 291 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 FBXO42Q6P3S6 717 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 TRIM73Q86UV7 250 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 NANOGP1Q8N7R0 232 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 BMFQ96LC9 184 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 MND1Q9BWT6 205 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 PLA2G12AQ9BZM1 189 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 S1PR5Q9H228 398 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 SRMSQ9H3Y6 488 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 CALML5Q9NZT1 146 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 PCOLCE2Q9UKZ9 415 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 SCML1Q9UN30 329 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 LIPT1Q9Y234 373 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 ENDOUP21128 410 aaKnown RBP13.66□□□□□ -0.22
TPM3-206ENST00000330188 GSTM3P21266 225 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 CTHP32929 405 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 SOX3P41225 446 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 ACTR1BP42025 376 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 TAS2R41P59536 307 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 ACTR1AP61163 376 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 TNFRSF17Q02223 184 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 PRKCDQ05655 676 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.66□□□□□ -0.22
TPM3-206ENST00000330188 COL9A2Q14055 689 aaPredicted RBP13.66□□□□□ -0.22
TPM3-206ENST00000330188 SPHARQ15513 63 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 FAM111BQ6SJ93 734 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 SLC22A16Q86VW1 577 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 MEX3DQ86XN8 651 aaKnown RBP13.66□□□□□ -0.22
TPM3-206ENST00000330188 LYSMD2Q8IV50 215 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 DIO2Q92813 273 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 TWSG1Q9GZX9 223 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 RACGAP1Q9H0H5 632 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 TMEM168Q9H0V1 697 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 POLE4Q9NR33 117 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 SEMA4GQ9NTN9 838 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 QPCTLQ9NXS2 382 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 NCKAP1Q9Y2A7 1128 aa13.66□□□□□ -0.22
TPM3-206ENST00000330188 FANCMQ8IYD8 2048 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 XIRP2A4UGR9 3374 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 CYP7B1O75881 506 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 HBQ1P09105 142 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 MAGP20916 626 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 S100A5P33763 92 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 SMSP52788 366 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 PDX1P52945 283 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 PRRT3Q5FWE3 981 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 C6orf132Q5T0Z8 1188 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 ATAD3BQ5T9A4 648 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 PAQR6Q6TCH4 344 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 USP30Q70CQ3 517 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 PRICKLE2Q7Z3G6 844 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 C16orf62Q7Z3J2 963 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 PROKR2Q8NFJ6 384 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 OR7G2Q8NG99 324 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 OR52I1Q8NGK6 324 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 GNPDA2Q8TDQ7 276 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 NR4A3Q92570 626 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 SLC22A18Q96BI1 424 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 TM4SF19Q96DZ7 209 aa13.65□□□□□ -0.22
TPM3-206ENST00000330188 SLC35A4Q96G79 324 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms