RNA–Protein interactions for RNA: ENST00000329553.2

RIPPLY3-201, Transcript of ripply transcriptional repressor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIPPLY3, Length 2,235 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3-201ENST00000329553 MAN2A2P49641 1150 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 ANXA11P50995 505 aaKnown RBP18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 MLLT10P55197 1068 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 GP2P55259 537 aaKnown RBP18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 KCNAB1Q14722 419 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 NDUFA9Q16795 377 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 C11orf74Q86VG3 221 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 ANKRD13BQ86YJ7 626 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 GPR32P1Q8NGA4 272 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 GEMIN6Q8WXD5 167 aaKnown RBP18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 ANKRD9Q96BM1 317 aaPredicted RBP18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 SPRTNQ9H040 489 aaPredicted RBP18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 IRAK4Q9NWZ3 460 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 SUSD2Q9UGT4 822 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 ZNF451Q9Y4E5 1061 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 UGT2B11O75310 529 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 PDE9AO76083 593 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 EPHA8P29322 1005 aaPredicted RBP18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 RRM2P31350 389 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 ARHGDIAP52565 204 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 PUM1Q14671 1186 aaKnown RBP eCLIP18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 TRMT12Q53H54 448 aaKnown RBP18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 KANSL1Q7Z3B3 1105 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 WDR53Q7Z5U6 358 aaPredicted RBP18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 SLC15A4Q8N697 577 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 CNIH3Q8TBE1 160 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 COL21A1Q96P44 957 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 ZNF300Q96RE9 604 aaPredicted RBP18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 ZNF607Q96SK3 696 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 DGCR6LQ9BY27 220 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 THSD1Q9NS62 852 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 EXD2Q9NVH0 621 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 WARS2Q9UGM6 360 aaKnown RBP18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 RP1P56715 2156 aa18.98■□□□□ 0.63
RIPPLY3-201ENST00000329553 NINQ8N4C6 2090 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 A0A1B0GTQ1 180 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 PTGES3LE9PB15 166 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 CBFA2T3O75081 653 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 CHRM4P08173 479 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 CD1CP29017 333 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 PPP2R1BP30154 601 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 SEPHS1P49903 392 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 FAM53BQ14153 422 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 SPCS2Q15005 226 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 ZNF628Q5EBL2 1059 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 KDM4DQ6B0I6 523 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 LGI4Q8N135 537 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 OR2L13Q8N349 312 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 ACTRT3Q9BYD9 372 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 PDP1Q9P0J1 537 aaPredicted RBP18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 HCN3Q9P1Z3 774 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 TESMINQ9Y4I5 508 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 CORINQ9Y5Q5 1042 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 MYO15AQ9UKN7 3530 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 DUX1O43812 170 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 INMTO95050 263 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 ATP1B1P05026 303 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 CSF2RBP32927 897 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 DAPP51397 102 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 CRISP3P54108 245 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 MAT1AQ00266 395 aaKnown RBP18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 KEAP1Q14145 624 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 NR1D2Q14995 579 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 CTF1Q16619 201 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 HLA-BQ31612 363 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 SNAP47Q5SQN1 464 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 DCDC5Q6ZRR9 648 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 PLXDC1Q8IUK5 500 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 SETD9Q8NE22 299 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 APOBEC4Q8WW27 367 aaKnown RBP18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 COX4I2Q96KJ9 171 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 ZNF347Q96SE7 839 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 RBCK1Q9BYM8 510 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 BCL2L10Q9HD36 194 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 NLGN3Q9NZ94 848 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 PCDHGB3Q9Y5G1 929 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 GPC6Q9Y625 555 aaPredicted RBP18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 HSPE1-MOB4S4R3N1 261 aa18.97■□□□□ 0.63
RIPPLY3-201ENST00000329553 ZNF99A8MXY4 864 aaPredicted RBP18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 J3KTA2 159 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 ANGPTL1O95841 491 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 IL5RAQ01344 420 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 EMX1Q04741 257 aaPredicted RBP18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 TCTE1Q5JU00 501 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 GARNL3Q5VVW2 1013 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 C16orf87Q6PH81 154 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 SNRNP27Q8WVK2 155 aaKnown RBP18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 FAR1Q8WVX9 515 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 SLC35A4Q96G79 324 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 EPYCQ99645 322 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 PTGFRNQ9P2B2 879 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 ZDBF2Q9HCK1 2354 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 XPNPEP2O43895 674 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 SERPINB7O75635 380 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 NSA2O95478 260 aaKnown RBP18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 HNRNPCP07910 306 aaKnown RBP eCLIP18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 ITGA2P17301 1181 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 NT5EP21589 574 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 ACVR2AP27037 513 aa18.96■□□□□ 0.63
RIPPLY3-201ENST00000329553 KCNJ5P48544 419 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms