RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 FAM170BA6NMN3 283 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 FHP07954 510 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 TIE1P35590 1138 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.37■□□□□ 0.21
COL9A1-201ENST00000320755 BAK1Q16611 211 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 KIAA1161Q6NSJ0 714 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 ABHD17CQ6PCB6 329 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 OR4N5Q8IXE1 308 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 KCT2Q8NC54 265 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 MORN4Q8NDC4 146 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 TEX47Q8TBZ9 253 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 NELL2Q99435 816 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 SPATA5L1Q9BVQ7 753 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 TEX101Q9BY14 249 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 SAP130Q9H0E3 1048 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 PRDM7Q9NQW5 492 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 ASB4Q9Y574 426 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 A8MV72 311 aaPredicted RBP16.37■□□□□ 0.21
COL9A1-201ENST00000320755 FCMRO60667 390 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 CCNKO75909 580 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 RAB36O95755 333 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 RCVRNP35243 200 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 MAGEA8P43361 318 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 BTN3A2P78410 334 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 HYAL2Q12891 473 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 FLYWCH1Q4VC44 716 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 RSBN1Q5VWQ0 802 aaPredicted RBP16.37■□□□□ 0.21
COL9A1-201ENST00000320755 FAM26EQ8N5C1 309 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 ASB15Q8WXK1 588 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 RNFT2Q96EX2 444 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 TXNDC15Q96J42 360 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 POLDIP3Q9BY77 421 aaKnown RBP16.37■□□□□ 0.21
COL9A1-201ENST00000320755 ABCB9Q9NP78 766 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 TXNL4BQ9NX01 149 aaKnown RBP16.37■□□□□ 0.21
COL9A1-201ENST00000320755 HTR3EA5X5Y0 456 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 SSTR4P31391 388 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 SDC2P34741 201 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 CD79BP40259 229 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 CASP3P42574 277 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 SMSP52788 366 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 TGM3Q08188 693 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 RUNX3Q13761 415 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 OCLNQ16625 522 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 CRTC2Q53ET0 693 aaPredicted RBP16.37■□□□□ 0.21
COL9A1-201ENST00000320755 C6orf132Q5T0Z8 1188 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 NXNL2Q5VZ03 156 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 SLC30A6Q6NXT4 461 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 C16orf62Q7Z3J2 963 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 LAPTM4BQ86VI4 370 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 SLC7A5P1Q8MH63 180 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 SIMC1Q8NDZ2 872 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 NUP43Q8NFH3 380 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 BBS10Q8TAM1 723 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 SP7Q8TDD2 431 aaPredicted RBP16.37■□□□□ 0.21
COL9A1-201ENST00000320755 CAPSLQ8WWF8 208 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 PRRC1Q96M27 445 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 OR7D2Q96RA2 312 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 NT5DC2Q9H857 520 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 NDUFB11Q9NX14 153 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 NDOR1Q9UHB4 597 aa16.37■□□□□ 0.21
COL9A1-201ENST00000320755 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.37■□□□□ 0.21
COL9A1-201ENST00000320755 A0A0C4DFX4 3053 aa16.36■□□□□ 0.21
COL9A1-201ENST00000320755 SYNDIG1LA6NDD5 238 aa16.36■□□□□ 0.21
COL9A1-201ENST00000320755 ZNF670-ZNF695F2Z2N8 137 aa16.36■□□□□ 0.21
COL9A1-201ENST00000320755 H3BQ06 376 aaPredicted RBP16.36■□□□□ 0.21
COL9A1-201ENST00000320755 ASGR2P07307 311 aa16.36■□□□□ 0.21
COL9A1-201ENST00000320755 CSNK2A2P19784 350 aaPredicted RBP16.36■□□□□ 0.21
COL9A1-201ENST00000320755 OR2B6P58173 313 aa16.36■□□□□ 0.21
COL9A1-201ENST00000320755 COX10Q12887 443 aa16.36■□□□□ 0.21
COL9A1-201ENST00000320755 FAM131AQ6UXB0 335 aa16.36■□□□□ 0.21
COL9A1-201ENST00000320755 SEMA4GQ9NTN9 838 aa16.36■□□□□ 0.21
COL9A1-201ENST00000320755 TBC1D24Q9ULP9 559 aa16.36■□□□□ 0.21
COL9A1-201ENST00000320755 COL4A3Q01955 1670 aa16.36■□□□□ 0.21
COL9A1-201ENST00000320755 GSTT2P0CG29 244 aa16.36■□□□□ 0.21
COL9A1-201ENST00000320755 GSTT2BP0CG30 244 aa16.36■□□□□ 0.21
COL9A1-201ENST00000320755 GPR4P46093 362 aa16.36■□□□□ 0.21
COL9A1-201ENST00000320755 CLDN2P57739 230 aa16.36■□□□□ 0.21
COL9A1-201ENST00000320755 RPS25P62851 125 aaKnown RBP16.36■□□□□ 0.21
COL9A1-201ENST00000320755 SNRPNP63162 240 aaKnown RBP16.36■□□□□ 0.21
COL9A1-201ENST00000320755 MLLT11Q13015 90 aaPredicted RBP16.36■□□□□ 0.21
COL9A1-201ENST00000320755 TJAP1Q5JTD0 557 aa16.36■□□□□ 0.21
COL9A1-201ENST00000320755 C1orf94Q6P1W5 598 aa16.36■□□□□ 0.21
COL9A1-201ENST00000320755 B3GLCTQ6Y288 498 aa16.36■□□□□ 0.21
COL9A1-201ENST00000320755 GATAD2AQ86YP4 633 aa16.36■□□□□ 0.21
COL9A1-201ENST00000320755 OR2L3Q8NG85 312 aa16.36■□□□□ 0.21
COL9A1-201ENST00000320755 OR8D4Q8NGM9 314 aa16.36■□□□□ 0.21
COL9A1-201ENST00000320755 TM9SF4Q92544 642 aa16.36■□□□□ 0.21
COL9A1-201ENST00000320755 APOBEC3BQ9UH17 382 aaKnown RBP16.36■□□□□ 0.21
COL9A1-201ENST00000320755 A0A075B6Q4 140 aa16.35■□□□□ 0.21
COL9A1-201ENST00000320755 A0A1W2PQU0 124 aa16.35■□□□□ 0.21
COL9A1-201ENST00000320755 HYKKA2RU49 373 aa16.35■□□□□ 0.21
COL9A1-201ENST00000320755 CEACAM5P06731 702 aa16.35■□□□□ 0.21
COL9A1-201ENST00000320755 CCNYL3P0C7X3 344 aa16.35■□□□□ 0.21
COL9A1-201ENST00000320755 NR2F6P10588 404 aa16.35■□□□□ 0.21
COL9A1-201ENST00000320755 MAN2A2P49641 1150 aa16.35■□□□□ 0.21
COL9A1-201ENST00000320755 LARS2Q15031 903 aaKnown RBP16.35■□□□□ 0.21
COL9A1-201ENST00000320755 C2orf27AQ580R0 203 aa16.35■□□□□ 0.21
COL9A1-201ENST00000320755 FAM109BQ6ICB4 259 aaPredicted RBP16.35■□□□□ 0.21
COL9A1-201ENST00000320755 SLC27A4Q6P1M0 643 aa16.35■□□□□ 0.21
COL9A1-201ENST00000320755 BHLHB9Q6PI77 547 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms