RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 FCRL4Q96PJ5 515 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 WFDC6Q9BQY6 131 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 ZNF556Q9HAH1 456 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 YBX2Q9Y2T7 364 aaKnown RBP14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 HCN4Q9Y3Q4 1203 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 TBC1D3DA0A087WVF3 549 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 TBC1D3IA0A087WXS9 549 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 TBC1D3EA0A087X179 549 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 TBC1D3KA0A087X1G2 549 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 C17orf113A0A1B0GUU1 675 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 TBC1D3FA6NER0 549 aaPredicted RBP14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 TBC1D3LB9A6J9 549 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 TBC1D3HP0C7X1 549 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 EVI2BP34910 448 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 MAPK9P45984 424 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 CCR8P51685 355 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 RAB8AP61006 207 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 PTGES3Q15185 160 aaKnown RBP14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 PYDC2Q56P42 97 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 PDZK1Q5T2W1 519 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 TBC1D3GQ6DHY5 549 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 TBC1D3CQ6IPX1 549 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 TBC1D3Q8IZP1 549 aaPredicted RBP14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 FAM181AQ8N9Y4 354 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 TMEM145Q8NBT3 493 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 ENKURQ8TC29 256 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 IL4I1Q96RQ9 567 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 TRMT61BQ9BVS5 477 aaKnown RBP14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 MCUBQ9NWR8 336 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 KLHL21Q9UJP4 597 aa14.67□□□□□ -0.06
SHROOM1-201ENST00000319854 CIB4A0PJX0 185 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 APEX1P27695 318 aaKnown RBP14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 CSTF2P33240 577 aaKnown RBP eCLIP14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 CLDN2P57739 230 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 ZNF33BQ06732 778 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 MLF2Q15773 248 aaPredicted RBP14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 TMEM52BQ4KMG9 183 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 METRNLQ641Q3 311 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 PLAG1Q6DJT9 500 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 CREB3L2Q70SY1 520 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 SLC38A5Q8WUX1 472 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 POP5Q969H6 163 aaKnown RBP14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 TM4SF18Q96CE8 201 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 GFM1Q96RP9 751 aaKnown RBP14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 EQTNQ9NQ60 294 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 FBXW2Q9UKT8 454 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 A8MUA0 341 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 NARSO43776 548 aaKnown RBP14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 SCG5P05408 212 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 MSL3P1P0C860 447 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 PTNP21246 168 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 CPN2P22792 545 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 FCARP24071 287 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 FAM46CQ5VWP2 391 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 KRT73Q86Y46 540 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 CPA6Q8N4T0 437 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 OXR1Q8N573 874 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 AQP11Q8NBQ7 271 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 OR8K5Q8NH50 307 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 PCNPQ8WW12 178 aaKnown RBP14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 TMEM203Q969S6 136 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 UBE2E3Q969T4 207 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 TMEM19Q96HH6 336 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 CD93Q9NPY3 652 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 C11orf16Q9NQ32 467 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 C12orf4Q9NQ89 552 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 GLTPQ9NZD2 209 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 THAP10Q9P2Z0 257 aaPredicted RBP14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 NLKQ9UBE8 527 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 PLEKHB1Q9UF11 243 aaPredicted RBP14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 POLHQ9Y253 713 aa14.66□□□□□ -0.06
SHROOM1-201ENST00000319854 PDPK1O15530 556 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 CSO75390 466 aaKnown RBP14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 GADD45GO95257 159 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 TSPAN19P0C672 248 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 RAB25P57735 213 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 HNRNPA0Q13151 305 aaKnown RBP14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 XKRXQ6PP77 449 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 ZNF767PQ75MW2 155 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 BCDIN3DQ7Z5W3 292 aaKnown RBP14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 CAMKMTQ7Z624 323 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 FBXO15Q8NCQ5 510 aaPredicted RBP14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 ATP6V1C2Q8NEY4 427 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 OR4C15Q8NGM1 316 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 CREB3L4Q8TEY5 395 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 ZBED6CLQ96FA7 236 aaPredicted RBP14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 GALNT9Q9HCQ5 603 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 EVA1BQ9NVM1 165 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 AHSPQ9NZD4 102 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 MALT1Q9UDY8 824 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 ZFR2Q9UPR6 939 aaKnown RBP14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 LSM2Q9Y333 95 aaKnown RBP14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 A0A1W2PQU0 124 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 ZNF670-ZNF695F2Z2N8 137 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 TRIM77I1YAP6 450 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 ADAMDEC1O15204 470 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 SEC14L5O43304 696 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 HBQ1P09105 142 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 CAV3P56539 151 aa14.65□□□□□ -0.06
SHROOM1-201ENST00000319854 BNC1Q01954 994 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms