RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 DNAJB8Q8NHS0 232 aa14.3□□□□□ -0.12
PDLIM5-202ENST00000318007 SFXN5Q8TD22 340 aa14.3□□□□□ -0.12
PDLIM5-202ENST00000318007 ADAMTS15Q8TE58 950 aa14.3□□□□□ -0.12
PDLIM5-202ENST00000318007 ABCD2Q9UBJ2 740 aa14.3□□□□□ -0.12
PDLIM5-202ENST00000318007 ZNF639Q9UID6 485 aa14.3□□□□□ -0.12
PDLIM5-202ENST00000318007 A0A087WV62 115 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 A8MUI8 341 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 CD63P08962 238 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 GABRA3P34903 492 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 DSTNP60981 165 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 SYPL1Q16563 259 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 FIGNL1Q6PIW4 674 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 OR2T12Q8NG77 320 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 ZNF583Q96ND8 569 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 ACTRT3Q9BYD9 372 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 C2orf92A0A1B0GVN3 265 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 GXYLT2A0PJZ3 443 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 WWP2O00308 870 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 COQ9O75208 318 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 PSG6Q00889 435 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 BIKQ13323 160 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 PIGGQ5H8A4 983 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 CYP2R1Q6VVX0 501 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 NPSR1Q6W5P4 371 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 NFAM1Q8NET5 270 aaPredicted RBP14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 NFKBIDQ8NI38 313 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 FIG4Q92562 907 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 MOAP1Q96BY2 351 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 RMND5BQ96G75 393 aaPredicted RBP14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 SLC35A4Q96G79 324 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 SH3GL1Q99961 368 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 QRSL1Q9H0R6 528 aaKnown RBP14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 OR10H1Q9Y4A9 318 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 V9GYQ6 96 aa14.29□□□□□ -0.12
PDLIM5-202ENST00000318007 LOC102723996A0A087X1L8 192 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 C15orf38-AP3S2A0A0A6YYH1 394 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 MED19A0JLT2 244 aaPredicted RBP14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 PSMG1O95456 288 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 GPX2P18283 190 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 KHKP50053 298 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 GPR143P51810 404 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 NR0B1P51843 470 aaKnown RBP14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 Q0VFX4 171 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 EBPQ15125 230 aaKnown RBP14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 ADRM1Q16186 407 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 GPAT3Q53EU6 434 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 SAMD4BQ5PRF9 694 aaKnown RBP14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 HSDL2Q6YN16 418 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 NDUFAF7Q7L592 441 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 SLC29A4Q7RTT9 530 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 GPR155Q7Z3F1 870 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 ARPINQ7Z6K5 226 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 FBXW8Q8N3Y1 598 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 SIRT6Q8N6T7 355 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 COX18Q8N8Q8 333 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 MORN4Q8NDC4 146 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 OR10Q1Q8NGQ4 319 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 VSTM2LQ96N03 204 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 ZNF700Q9H0M5 742 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 NXF5Q9H1B4 397 aaKnown RBP14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 CCDC86Q9H6F5 360 aaKnown RBP14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 FBXO34Q9NWN3 711 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 GIN1Q9NXP7 522 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 SLC7A8Q9UHI5 535 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 PCDHGA6Q9Y5G7 932 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 CACNA1AO00555 2505 aa14.28□□□□□ -0.12
PDLIM5-202ENST00000318007 ACACAQ13085 2346 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 NPIPA5A0A0B4J1W7 369 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 PRAMEF27A3QJZ7 478 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 ARGFXA6NJG6 315 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 A6NL46 340 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 C1QTNF9BB2RNN3 333 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 NPIPA7E9PJI5 369 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 PEX12O00623 359 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 MAN1A2O60476 641 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 C1QTNF9P0C862 333 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 NPIPA8P0DM63 369 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 EIF2S3P41091 472 aaKnown RBP14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 RNF4P78317 190 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 VAC14Q08AM6 782 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 FUT5Q11128 374 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 ZNHIT3Q15649 155 aaPredicted RBP14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 GCNT6Q5T4J0 391 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 HLA-DQA1Q5Y7H0 255 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 DESI1Q6ICB0 168 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 C16orf62Q7Z3J2 963 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 PTOV1Q86YD1 416 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 RAB43Q86YS6 212 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 ZNF248Q8NDW4 579 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 OR5M3Q8NGP4 307 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 EFHD2Q96C19 240 aaPredicted RBP14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 ART5Q96L15 291 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 WWTR1Q9GZV5 400 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 ANGPTL2Q9UKU9 493 aa14.27□□□□□ -0.12
PDLIM5-202ENST00000318007 GSTA4O15217 222 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 SLC28A2O43868 658 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 SLITRK5O94991 958 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 F10P00742 488 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 OPN1SWP03999 348 aa14.27□□□□□ -0.13
PDLIM5-202ENST00000318007 ALOX5P09917 674 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms