RNA–Protein interactions for RNA: ENST00000317716.13

CDHR3-201, Transcript of cadherin related family member 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDHR3, Length 3,813 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-201ENST00000317716 HOXA9P31269 272 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 MNDAP41218 407 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 SLC11A1P49279 550 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 OR12D2P58182 307 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 GPR50Q13585 617 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 IRF3Q14653 427 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 EIF4HQ15056 248 aaKnown RBP7.13□□□□□ -1.27
CDHR3-201ENST00000317716 TAF13Q15543 124 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 ZNF630Q2M218 657 aaPredicted RBP7.13□□□□□ -1.27
CDHR3-201ENST00000317716 ZNF311Q5JNZ3 666 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 SLC36A4Q6YBV0 504 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 COMMD6Q7Z4G1 85 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 CCDC116Q8IYX3 515 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 MMP21Q8N119 569 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 CHAC2Q8WUX2 184 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 ST8SIA4Q92187 359 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 PGAP3Q96FM1 320 aaPredicted RBP7.13□□□□□ -1.27
CDHR3-201ENST00000317716 OPALINQ96PE5 141 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 F2RL3Q96RI0 385 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 EPYCQ99645 322 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 C7orf50Q9BRJ6 194 aaKnown RBP7.13□□□□□ -1.27
CDHR3-201ENST00000317716 SRRQ9GZT4 340 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 SLC25A18Q9H1K4 315 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 MTG2Q9H4K7 406 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 OR2S2Q9NQN1 319 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 TMEM184CQ9NVA4 438 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 SPG21Q9NZD8 308 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 IL17CQ9P0M4 197 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 MYEF2Q9P2K5 600 aaKnown RBP7.13□□□□□ -1.27
CDHR3-201ENST00000317716 PLEKHA6Q9Y2H5 1048 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 CACNG2Q9Y698 323 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 OR2AT4A6NND4 320 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 SLC38A8A6NNN8 435 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 ZNF879B4DU55 563 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 PDCD5O14737 125 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 CCL16O15467 120 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 CXCL14O95715 111 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 LAMP2P13473 410 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 SNRPBP14678 240 aaKnown RBP7.13□□□□□ -1.27
CDHR3-201ENST00000317716 CBR1P16152 277 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 RHCEP18577 417 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 SHC1P29353 583 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 TIA1P31483 386 aaKnown RBP eCLIP7.13□□□□□ -1.27
CDHR3-201ENST00000317716 AHRP35869 848 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 GCGRP47871 477 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 UBE2MP61081 183 aaKnown RBP7.13□□□□□ -1.27
CDHR3-201ENST00000317716 CHRNEQ04844 493 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 SF3A2Q15428 464 aaKnown RBP7.13□□□□□ -1.27
CDHR3-201ENST00000317716 FAM27D1Q5T7N8 215 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 ALG1LQ6GMV1 187 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 LAIR2Q6ISS4 152 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 UNC5DQ6UXZ4 953 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 SERPINA11Q86U17 422 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 FAM129CQ86XR2 697 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 CPOQ8IVL8 374 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 ZFP82Q8N141 532 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 RAB42Q8N4Z0 105 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 LILRA3Q8N6C8 439 aaPredicted RBP7.13□□□□□ -1.27
CDHR3-201ENST00000317716 ANKK1Q8NFD2 765 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 ACOT12Q8WYK0 555 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 KLK6Q92876 244 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 SLC39A13Q96H72 371 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 PKMYT1Q99640 499 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 PPA2Q9H2U2 334 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 SYNPO2LQ9H987 977 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 ERVMER34-1Q9H9K5 563 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 ZDHHC4Q9NPG8 344 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 KRCC1Q9NPI7 259 aaPredicted RBP7.13□□□□□ -1.27
CDHR3-201ENST00000317716 WSB2Q9NYS7 404 aaPredicted RBP7.13□□□□□ -1.27
CDHR3-201ENST00000317716 B4GALT6Q9UBX8 382 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 TAC3Q9UHF0 121 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 ERVW-1Q9UQF0 538 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 A0A1B0GV50 99 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 FEZF1A0PJY2 475 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 FAM171A2A8MVW0 826 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 LRRN3E7EW58 273 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 HYAL3O43820 417 aaPredicted RBP7.13□□□□□ -1.27
CDHR3-201ENST00000317716 FARS2O95363 451 aaKnown RBP7.13□□□□□ -1.27
CDHR3-201ENST00000317716 C1QBP02746 253 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 VAMP1P23763 118 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 EDNRAP25101 427 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 CCR7P32248 378 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 ETV5P41161 510 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 ETV1P50549 477 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 TAGLNQ01995 201 aaKnown RBP7.13□□□□□ -1.27
CDHR3-201ENST00000317716 EXOSC2Q13868 293 aaKnown RBP7.13□□□□□ -1.27
CDHR3-201ENST00000317716 GRK1Q15835 563 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 C3P1Q6ZMU1 363 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 C6orf120Q7Z4R8 191 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 CCDC190Q86UF4 302 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 CCDC71Q8IV32 467 aaPredicted RBP7.13□□□□□ -1.27
CDHR3-201ENST00000317716 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.13□□□□□ -1.27
CDHR3-201ENST00000317716 OR7G3Q8NG95 312 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 ZCCHC10Q8TBK6 192 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 ZNF558Q96NG5 402 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 SEC22CQ9BRL7 303 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 SPATA5L1Q9BVQ7 753 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 LRRN3Q9H3W5 708 aa7.13□□□□□ -1.27
CDHR3-201ENST00000317716 DDX31Q9H8H2 851 aaKnown RBP7.13□□□□□ -1.27
CDHR3-201ENST00000317716 RDH14Q9HBH5 336 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms