RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 GNB5O14775 395 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 ICOSLGO75144 302 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 REM1O75628 298 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 CBR3O75828 277 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 EPPINO95925 133 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 PROCP04070 461 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 CPA3P15088 417 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 ADH7P40394 386 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 SLCO1A2P46721 670 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 CRYZQ08257 329 aaKnown RBP16.23■□□□□ 0.19
TPM1-203ENST00000317516 ZNF763Q0D2J5 394 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 C2orf80Q0P641 193 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 NHSL2Q5HYW2 709 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 FNDC7Q5VTL7 733 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 CES4AQ5XG92 561 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 VASNQ6EMK4 673 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 ANGPTL8Q6UXH0 198 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 FRMD7Q6ZUT3 714 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 SH2D5Q6ZV89 423 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 WDR53Q7Z5U6 358 aaPredicted RBP16.23■□□□□ 0.19
TPM1-203ENST00000317516 HOMEZQ8IX15 550 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 FAM9CQ8IZT9 166 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 OR9A2Q8NGT5 310 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 FAM76AQ8TAV0 307 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 KAT2AQ92830 837 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 LRRC46Q96FV0 321 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 COL21A1Q96P44 957 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 NODALQ96S42 347 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 ZNF559Q9BR84 538 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 OSBPL11Q9BXB4 747 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 EBPLQ9BY08 206 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 TAS2R9Q9NYW1 312 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 KCNN3Q9UGI6 736 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 MID2Q9UJV3 735 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 CACNA1CQ13936 2221 aa16.23■□□□□ 0.19
TPM1-203ENST00000317516 UBFD1O14562 309 aaKnown RBP16.22■□□□□ 0.19
TPM1-203ENST00000317516 PLOD3O60568 738 aa16.22■□□□□ 0.19
TPM1-203ENST00000317516 PLIN3O60664 434 aa16.22■□□□□ 0.19
TPM1-203ENST00000317516 UGT2B11O75310 529 aa16.22■□□□□ 0.19
TPM1-203ENST00000317516 SLITRK5O94991 958 aa16.22■□□□□ 0.19
TPM1-203ENST00000317516 IL2RAP01589 272 aa16.22■□□□□ 0.19
TPM1-203ENST00000317516 SHBGP04278 402 aa16.22■□□□□ 0.19
TPM1-203ENST00000317516 DDCP20711 480 aa16.22■□□□□ 0.19
TPM1-203ENST00000317516 PTPN6P29350 595 aa16.22■□□□□ 0.19
TPM1-203ENST00000317516 SOX18P35713 384 aa16.22■□□□□ 0.19
TPM1-203ENST00000317516 PEX19P40855 299 aa16.22■□□□□ 0.19
TPM1-203ENST00000317516 MRPS22P82650 360 aaKnown RBP16.22■□□□□ 0.19
TPM1-203ENST00000317516 EFR3AQ14156 821 aa16.22■□□□□ 0.19
TPM1-203ENST00000317516 CEBPEQ15744 281 aa16.22■□□□□ 0.19
TPM1-203ENST00000317516 FAM219BQ5XKK7 198 aa16.22■□□□□ 0.19
TPM1-203ENST00000317516 TRIM46Q7Z4K8 759 aa16.22■□□□□ 0.19
TPM1-203ENST00000317516 LACC1Q8IV20 430 aa16.22■□□□□ 0.19
TPM1-203ENST00000317516 SIMC1Q8NDZ2 872 aa16.22■□□□□ 0.19
TPM1-203ENST00000317516 ABTB1Q969K4 478 aaPredicted RBP16.22■□□□□ 0.19
TPM1-203ENST00000317516 TMBIM1Q969X1 311 aa16.22■□□□□ 0.19
TPM1-203ENST00000317516 NTNG2Q96CW9 530 aa16.22■□□□□ 0.19
TPM1-203ENST00000317516 METTL2AQ96IZ6 378 aaKnown RBP16.22■□□□□ 0.19
TPM1-203ENST00000317516 BTBD9Q96Q07 612 aa16.22■□□□□ 0.19
TPM1-203ENST00000317516 MIEF1Q9NQG6 463 aa16.22■□□□□ 0.19
TPM1-203ENST00000317516 OXSMQ9NWU1 459 aa16.22■□□□□ 0.19
TPM1-203ENST00000317516 EXO1Q9UQ84 846 aaKnown RBP16.22■□□□□ 0.19
TPM1-203ENST00000317516 PRAMEF25A6NGN4 478 aa16.21■□□□□ 0.19
TPM1-203ENST00000317516 SMIM23A6NLE4 172 aa16.21■□□□□ 0.19
TPM1-203ENST00000317516 DVL2O14641 736 aa16.21■□□□□ 0.19
TPM1-203ENST00000317516 SNPHO15079 494 aa16.21■□□□□ 0.19
TPM1-203ENST00000317516 COQ9O75208 318 aa16.21■□□□□ 0.19
TPM1-203ENST00000317516 ERN1O75460 977 aaKnown RBP16.21■□□□□ 0.19
TPM1-203ENST00000317516 ACTL6AO96019 429 aa16.21■□□□□ 0.19
TPM1-203ENST00000317516 UROSP10746 265 aa16.21■□□□□ 0.19
TPM1-203ENST00000317516 BMP7P18075 431 aa16.21■□□□□ 0.19
TPM1-203ENST00000317516 KRT4P19013 534 aa16.21■□□□□ 0.19
TPM1-203ENST00000317516 TIMP3P35625 211 aa16.21■□□□□ 0.19
TPM1-203ENST00000317516 FOXA1P55317 472 aa16.21■□□□□ 0.19
TPM1-203ENST00000317516 MYBPHQ13203 477 aa16.21■□□□□ 0.19
TPM1-203ENST00000317516 ACSF3Q4G176 576 aaPredicted RBP16.21■□□□□ 0.19
TPM1-203ENST00000317516 EIPR1Q53HC9 387 aa16.21■□□□□ 0.19
TPM1-203ENST00000317516 WIPI1Q5MNZ9 446 aaPredicted RBP16.21■□□□□ 0.19
TPM1-203ENST00000317516 LIX1LQ8IVB5 337 aa16.21■□□□□ 0.19
TPM1-203ENST00000317516 CDC26Q8NHZ8 85 aa16.21■□□□□ 0.19
TPM1-203ENST00000317516 PRDM14Q9GZV8 571 aa16.21■□□□□ 0.19
TPM1-203ENST00000317516 TAS2R7Q9NYW3 318 aa16.21■□□□□ 0.19
TPM1-203ENST00000317516 CAMK2AQ9UQM7 478 aa16.21■□□□□ 0.19
TPM1-203ENST00000317516 SLC6A5Q9Y345 797 aa16.21■□□□□ 0.19
TPM1-203ENST00000317516 RSL1D1O76021 490 aaKnown RBP16.2■□□□□ 0.18
TPM1-203ENST00000317516 CT45A8P0DMV1 189 aa16.2■□□□□ 0.18
TPM1-203ENST00000317516 CT45A9P0DMV2 189 aa16.2■□□□□ 0.18
TPM1-203ENST00000317516 IL12BP29460 328 aa16.2■□□□□ 0.18
TPM1-203ENST00000317516 NTSP30990 170 aa16.2■□□□□ 0.18
TPM1-203ENST00000317516 NCBP2P52298 156 aaKnown RBP eCLIP16.2■□□□□ 0.18
TPM1-203ENST00000317516 RCAN2Q14206 197 aa16.2■□□□□ 0.18
TPM1-203ENST00000317516 CT45A2Q5DJT8 189 aa16.2■□□□□ 0.18
TPM1-203ENST00000317516 LIPMQ5VYY2 423 aa16.2■□□□□ 0.18
TPM1-203ENST00000317516 NSUN5P2Q63ZY6 315 aa16.2■□□□□ 0.18
TPM1-203ENST00000317516 FAM83FQ8NEG4 500 aaPredicted RBP16.2■□□□□ 0.18
TPM1-203ENST00000317516 SLC35A4Q96G79 324 aa16.2■□□□□ 0.18
TPM1-203ENST00000317516 VSTM2LQ96N03 204 aa16.2■□□□□ 0.18
TPM1-203ENST00000317516 ADOQ96SZ5 270 aa16.2■□□□□ 0.18
TPM1-203ENST00000317516 UGT2B28Q9BY64 529 aa16.2■□□□□ 0.18
TPM1-203ENST00000317516 IQCGQ9H095 443 aaKnown RBP16.2■□□□□ 0.18
TPM1-203ENST00000317516 ANKRA2Q9H9E1 313 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms