RNA–Protein interactions for RNA: ENST00000316707.10

PTPN13-201, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 7,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-201ENST00000316707 ZCCHC2Q9C0B9 1178 aaKnown RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 PITHD1Q9GZP4 211 aaPredicted RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 MED11Q9P086 117 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 A0A0A6YYJ9 748 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 A0A1B0GTQ1 180 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 SLC38A8A6NNN8 435 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 PI15O43692 258 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 DUSP11O75319 330 aaKnown RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 RGS9O75916 674 aaPredicted RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 SLCO2B1O94956 709 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 PRAMEF12O95522 483 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 HOXD4P09016 255 aaPredicted RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 ETV5P41161 510 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 FABP5Q01469 135 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 SCRN3Q0VDG4 424 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 LEXMQ3ZCV2 418 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 OR2G6Q5TZ20 316 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 CXorf57Q6NSI4 855 aaKnown RBP4.52□□□□□ -1.69
PTPN13-201ENST00000316707 PDZD9Q8IXQ8 264 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 IFT46Q9NQC8 304 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 RHCGQ9UBD6 479 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 LIPT1Q9Y234 373 aa4.52□□□□□ -1.69
PTPN13-201ENST00000316707 PSME4Q14997 1843 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF840PA6NDX5 716 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 KDM4EB2RXH2 506 aaPredicted RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 STC2O76061 302 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 IGHA1P01876 353 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 C1SP09871 688 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF865P0CJ78 1059 aaPredicted RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 TNFRSF1BP20333 461 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 FPR3P25089 353 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 DHODHQ02127 395 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 AADACL4Q5VUY2 407 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 PAQR6Q6TCH4 344 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 CRTC1Q6UUV9 634 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 C3P1Q6ZMU1 363 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 GNPDA2Q8TDQ7 276 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 CXorf40AQ8TE69 158 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 C16orf78Q8WTQ4 265 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 MRPL48Q96GC5 212 aaKnown RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 TOE1Q96GM8 510 aaKnown RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 LCORQ96JN0 433 aaPredicted RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 SECISBP2Q96T21 854 aaKnown RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 FCF1Q9Y324 198 aaKnown RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 GPR39O43194 453 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 EEF1E1O43324 174 aaKnown RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 SULT1B1O43704 296 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 MT-ND5P03915 603 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 NR2F1P10589 423 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 MMP11P24347 488 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 MEIOBQ8N635 442 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 SCARB1Q8WTV0 552 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 SLC38A5Q8WUX1 472 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 C12orf66Q96MD2 445 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 FAIM2Q9BWQ8 316 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 RNF32Q9H0A6 362 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 MBD2Q9UBB5 411 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 EXO1Q9UQ84 846 aaKnown RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 LOC105369274A0A096LPK9 316 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 A0A1B0GUH1 482 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 HOXA2O43364 376 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 NDUFA2O43678 99 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 ELK1P19419 428 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 POU3F3P20264 500 aaPredicted RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 CCR9P51686 369 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 MANFP55145 182 aaKnown RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 DLX5P56178 289 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 TAS2R50P59544 299 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 TSPAN5P62079 268 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 FLYWCH1Q4VC44 716 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 TMEM81Q6P7N7 255 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 TMEM65Q6PI78 240 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 OR4N4Q8N0Y3 316 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 OR4M2Q8NGB6 313 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 SLC2A12Q8TD20 617 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 SMIM4Q8WVI0 70 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 SMPDL3AQ92484 453 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 MOAP1Q96BY2 351 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 ZNF514Q96K75 400 aaPredicted RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 TM6SF2Q9BZW4 377 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 SHARPINQ9H0F6 387 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 B3GAT2Q9NPZ5 323 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 SLC39A1Q9NY26 324 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 ADAM29Q9UKF5 820 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 ATG13O75143 517 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 POP4O95707 220 aaKnown RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 ALDH1A1P00352 501 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 EPHX1P07099 455 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 IFNGR1P15260 489 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 CD22P20273 847 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 MAPK3P27361 379 aaPredicted RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 THPOP40225 353 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 ACTC1P68032 377 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 ACTA1P68133 377 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 SMAD3P84022 425 aaKnown RBP4.51□□□□□ -1.69
PTPN13-201ENST00000316707 EFNB1P98172 346 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 PODNL1Q6PEZ8 512 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 WASH2PQ6VEQ5 465 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 IQCHQ86VS3 1027 aa4.51□□□□□ -1.69
PTPN13-201ENST00000316707 ARIH2OSQ8N7S6 290 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms