RNA–Protein interactions for RNA: ENST00000314845.7

AMBRA1-201, Transcript of autophagy and beclin 1 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AMBRA1, Length 5,023 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-201ENST00000314845 FAM227AF5H4B4 570 aa11.35□□□□□ -0.59
AMBRA1-201ENST00000314845 RNASET2O00584 256 aaKnown RBP11.35□□□□□ -0.59
AMBRA1-201ENST00000314845 BRINP1O60477 761 aa11.35□□□□□ -0.59
AMBRA1-201ENST00000314845 CD38P28907 300 aa11.35□□□□□ -0.59
AMBRA1-201ENST00000314845 HLCSP50747 726 aa11.35□□□□□ -0.59
AMBRA1-201ENST00000314845 NR0B1P51843 470 aaKnown RBP11.35□□□□□ -0.59
AMBRA1-201ENST00000314845 DEFB133Q30KQ1 61 aa11.35□□□□□ -0.59
AMBRA1-201ENST00000314845 CST9Q5W186 159 aa11.35□□□□□ -0.59
AMBRA1-201ENST00000314845 DUS1LQ6P1R4 473 aaKnown RBP11.35□□□□□ -0.59
AMBRA1-201ENST00000314845 SLC37A3Q8NCC5 494 aa11.35□□□□□ -0.59
AMBRA1-201ENST00000314845 OR52E1Q8NGJ3 308 aa11.35□□□□□ -0.59
AMBRA1-201ENST00000314845 OR52E2Q8NGJ4 325 aa11.35□□□□□ -0.59
AMBRA1-201ENST00000314845 C17orf50Q8WW18 174 aa11.35□□□□□ -0.59
AMBRA1-201ENST00000314845 FAM118AQ9NWS6 357 aa11.35□□□□□ -0.59
AMBRA1-201ENST00000314845 POU2F3Q9UKI9 436 aa11.35□□□□□ -0.59
AMBRA1-201ENST00000314845 LOC100509620A0A075B734 347 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 FXYD6-FXYD2A0A087WZ82 144 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 NME4O00746 187 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 SOCS7O14512 581 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 CD3GP09693 182 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 DHRS4L1P0CG22 281 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 ZNF35P13682 527 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 ZNF43P17038 809 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 CTSCP53634 463 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 UBE2NP61088 152 aaKnown RBP11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 PIGGQ5H8A4 983 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 XKR5Q6UX68 686 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 NRMQ8IXM6 262 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 MARVELD2Q8N4S9 558 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 ACOT4Q8N9L9 421 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 KLHDC9Q8NEP7 349 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 OR14L1PQ8NHC6 308 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 FAM174AQ8TBP5 190 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 SLC41A3Q96GZ6 507 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 POTEKPQ9BYX7 375 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 SLC5A7Q9GZV3 580 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 FXYD6Q9H0Q3 95 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 IRF2BPLQ9H1B7 796 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 OR10A4Q9H209 315 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 C5AR2Q9P296 337 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 ALG5Q9Y673 324 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 A0A1B0GVC2 190 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 OR6C70A6NIJ9 312 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 NDUFB2O95178 105 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 SCGB1D2O95969 90 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 PABPC4LP0CB38 370 aaKnown RBP11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 MTNR1AP48039 350 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 PXNP49023 591 aaPredicted RBP11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 CTXN1P60606 82 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 S100A10P60903 97 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 IRF4Q15306 451 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 ZNF423Q2M1K9 1284 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 PKDCCQ504Y2 493 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 SLC25A25Q6KCM7 469 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 ZNF765Q7L2R6 523 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 TMPRSS12Q86WS5 348 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 ZNF584Q8IVC4 421 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 FOXRED2Q8IWF2 684 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 NAGSQ8N159 534 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 HOXB13Q92826 284 aaPredicted RBP11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 SOX17Q9H6I2 414 aaPredicted RBP11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 TMEM165Q9HC07 324 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 ZNF334Q9HCZ1 680 aaPredicted RBP11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 CARD8Q9Y2G2 431 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 OR2T1O43869 369 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 PRKYO43930 277 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 ATE1O95260 518 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 CD6P30203 668 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 FOLR3P41439 243 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 ETV4P43268 484 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 PRLHRP49683 370 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 TRA2BP62995 288 aaKnown RBP11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 GALK2Q01415 458 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 DNASE1L3Q13609 305 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 GK3PQ14409 553 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 NKAPLQ5M9Q1 402 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 C3orf33Q6P1S2 294 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 ENPP6Q6UWR7 440 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 ALKAL1Q6UXT8 129 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 MCATQ8IVS2 390 aaKnown RBP11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 RFT1Q96AA3 541 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 ERVK-18Q9QC07 812 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 AP1M2Q9Y6Q5 423 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 MYH13Q9UKX3 1938 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 C13orf42A0A1B0GVH6 325 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 LRRTM2O43300 516 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 SNAPC5O75971 98 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 STSP08842 583 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 ZNF888P0CJ79 500 aaPredicted RBP11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 PNMTP11086 282 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 SDC1P18827 310 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 HOXD9P28356 352 aaPredicted RBP11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 CCR7P32248 378 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 THBS2P35442 1172 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 INHBCP55103 352 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 FXYD6P3P58550 94 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 NFATC4Q14934 902 aa11.34□□□□□ -0.59
AMBRA1-201ENST00000314845 SF3B4Q15427 424 aaKnown RBP eCLIP11.34□□□□□ -0.592e-6■■■■□ 24.9
AMBRA1-201ENST00000314845 SLC18B1Q6NT16 456 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms