RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 ZC3H12DA2A288 527 aaKnown RBP13.54□□□□□ -0.24
CSNK1D-202ENST00000314028 MID1O15344 667 aa13.54□□□□□ -0.24
CSNK1D-202ENST00000314028 C1orf105O95561 183 aa13.54□□□□□ -0.24
CSNK1D-202ENST00000314028 ACSL1P33121 698 aa13.54□□□□□ -0.24
CSNK1D-202ENST00000314028 CLDN2P57739 230 aa13.54□□□□□ -0.24
CSNK1D-202ENST00000314028 GPLD1P80108 840 aa13.54□□□□□ -0.24
CSNK1D-202ENST00000314028 KCNC3Q14003 757 aa13.54□□□□□ -0.24
CSNK1D-202ENST00000314028 MRPL58Q14197 206 aaKnown RBP13.54□□□□□ -0.24
CSNK1D-202ENST00000314028 MEIOBQ8N635 442 aa13.54□□□□□ -0.24
CSNK1D-202ENST00000314028 OR5P2Q8WZ92 322 aa13.54□□□□□ -0.24
CSNK1D-202ENST00000314028 IRF7Q92985 503 aa13.54□□□□□ -0.24
CSNK1D-202ENST00000314028 SPATA9Q9BWV2 254 aa13.54□□□□□ -0.24
CSNK1D-202ENST00000314028 BRF2Q9HAW0 419 aa13.54□□□□□ -0.24
CSNK1D-202ENST00000314028 C3orf14Q9HBI5 128 aa13.54□□□□□ -0.24
CSNK1D-202ENST00000314028 NTNG1Q9Y2I2 539 aa13.54□□□□□ -0.24
CSNK1D-202ENST00000314028 MAU2Q9Y6X3 613 aa13.54□□□□□ -0.24
CSNK1D-202ENST00000314028 STX11O75558 287 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 ARHGEF15O94989 841 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 FAPQ12884 760 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 CEACAM19Q7Z692 300 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 TRAM1L1Q8N609 369 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 RFT1Q96AA3 541 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 THSD1Q9NS62 852 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 PLCXD1Q9NUJ7 323 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 TDP1Q9NUW8 608 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 RDH8Q9NYR8 311 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 PLXNA1Q9UIW2 1896 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 ZAR1LA6NP61 321 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 GFYI3L273 518 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 POLR1CO15160 346 aaPredicted RBP13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 RPN2P04844 631 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 RHAGQ02094 409 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 MLLT11Q13015 90 aaPredicted RBP13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 DSG2Q14126 1118 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 SYT14P1Q58G82 188 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 GET4Q7L5D6 327 aaPredicted RBP13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 VRK2Q86Y07 508 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 SETD6Q8TBK2 473 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 ST6GAL2Q96JF0 529 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 SAMD8Q96LT4 415 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 MCCC1Q96RQ3 725 aaPredicted RBP13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 DPH7Q9BTV6 452 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 SRRQ9GZT4 340 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 KCNN2Q9H2S1 579 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 TAAR2Q9P1P5 351 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 KCNE1BA0A087WTH5 132 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 NPIPA5A0A0B4J1W7 369 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 TRBV5-4A0A0C4DH59 114 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 NPIPA7E9PJI5 369 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 FABP7O15540 132 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 HCN1O60741 890 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 ADH1AP07327 375 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 NPIPA8P0DM63 369 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 NAA10P41227 235 aaPredicted RBP13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 SRP9P49458 86 aaKnown RBP13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 KHKP50053 298 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 RAE1P78406 368 aaKnown RBP13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 PRR5P85299 388 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 FAM27D1Q5T7N8 215 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 MEDAGQ5VYS4 303 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 PGBD2Q6P3X8 592 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 SYT9Q86SS6 491 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 DOCK6Q96HP0 2047 aa13.53□□□□□ -0.24
CSNK1D-202ENST00000314028 IQCMA0A1B0GVH7 501 aa13.52□□□□□ -0.24
CSNK1D-202ENST00000314028 HYKKA2RU49 373 aa13.52□□□□□ -0.24
CSNK1D-202ENST00000314028 FAM86C2PA6NEL3 165 aa13.52□□□□□ -0.24
CSNK1D-202ENST00000314028 LRRC72A6NJI9 287 aa13.52□□□□□ -0.24
CSNK1D-202ENST00000314028 PROM1O43490 865 aa13.52□□□□□ -0.24
CSNK1D-202ENST00000314028 PEPDP12955 493 aa13.52□□□□□ -0.24
CSNK1D-202ENST00000314028 STOMP27105 288 aa13.52□□□□□ -0.24
CSNK1D-202ENST00000314028 GRPRP30550 384 aa13.52□□□□□ -0.24
CSNK1D-202ENST00000314028 PRPF38BQ5VTL8 546 aaKnown RBP13.52□□□□□ -0.24
CSNK1D-202ENST00000314028 ZNF613Q6PF04 617 aa13.52□□□□□ -0.24
CSNK1D-202ENST00000314028 POMZP3Q6PJE2 187 aa13.52□□□□□ -0.24
CSNK1D-202ENST00000314028 SNX33Q8WV41 574 aa13.52□□□□□ -0.24
CSNK1D-202ENST00000314028 OVCA2Q8WZ82 227 aa13.52□□□□□ -0.24
CSNK1D-202ENST00000314028 OR8D1Q8WZ84 308 aa13.52□□□□□ -0.24
CSNK1D-202ENST00000314028 KRCC1Q9NPI7 259 aaPredicted RBP13.52□□□□□ -0.24
CSNK1D-202ENST00000314028 TM7SF3Q9NS93 570 aa13.52□□□□□ -0.24
CSNK1D-202ENST00000314028 MYO16Q9Y6X6 1858 aa13.52□□□□□ -0.25
CSNK1D-202ENST00000314028 ZNF236Q9UL36 1845 aa13.52□□□□□ -0.25
CSNK1D-202ENST00000314028 A0A0G2JMP0 313 aa13.52□□□□□ -0.25
CSNK1D-202ENST00000314028 A0A0X1KG70 313 aa13.52□□□□□ -0.25
CSNK1D-202ENST00000314028 SLC31A1O15431 190 aa13.52□□□□□ -0.25
CSNK1D-202ENST00000314028 UGDHO60701 494 aa13.52□□□□□ -0.25
CSNK1D-202ENST00000314028 RPP14O95059 124 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-202ENST00000314028 SYPP08247 313 aa13.52□□□□□ -0.25
CSNK1D-202ENST00000314028 PUM1Q14671 1186 aaKnown RBP eCLIP13.52□□□□□ -0.255e-6■■□□□ 12
CSNK1D-202ENST00000314028 ZNF805Q5CZA5 627 aa13.52□□□□□ -0.25
CSNK1D-202ENST00000314028 MLIPQ5VWP3 458 aa13.52□□□□□ -0.25
CSNK1D-202ENST00000314028 KHDRBS2Q5VWX1 349 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-202ENST00000314028 METTL2BQ6P1Q9 378 aaKnown RBP13.52□□□□□ -0.25
CSNK1D-202ENST00000314028 SERPINA12Q8IW75 414 aa13.52□□□□□ -0.25
CSNK1D-202ENST00000314028 KIAA1958Q8N8K9 716 aa13.52□□□□□ -0.25
CSNK1D-202ENST00000314028 OR4M2Q8NGB6 313 aa13.52□□□□□ -0.25
CSNK1D-202ENST00000314028 ZNF354BQ96LW1 612 aa13.52□□□□□ -0.25
CSNK1D-202ENST00000314028 ZNF582Q96NG8 517 aaPredicted RBP13.52□□□□□ -0.25
CSNK1D-202ENST00000314028 KATNB1Q9BVA0 655 aa13.52□□□□□ -0.25
CSNK1D-202ENST00000314028 OR1A2Q9Y585 309 aa13.52□□□□□ -0.25
CSNK1D-202ENST00000314028 TGM5O43548 720 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms