RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 BOKQ9UMX3 212 aaPredicted RBP13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 CFL2Q9Y281 166 aa13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 WBP11Q9Y2W2 641 aaKnown RBP13.36□□□□□ -0.27
PPP1CA-201ENST00000312989 AKAP9Q99996 3911 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 A0A087WV62 115 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 UPK1AO00322 258 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 SLC28A1O00337 649 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 PIP5K1BO14986 540 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 TSPAN2O60636 221 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 HCN1O60741 890 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 TBX19O60806 448 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 LINC00032P0C843 101 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 PTPN6P29350 595 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 MC3RP41968 323 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 FRKP42685 505 aaPredicted RBP13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 TMED10P49755 219 aaKnown RBP13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 DCAF7P61962 342 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 IMPG1Q17R60 797 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 SP5Q6BEB4 398 aaPredicted RBP13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 FAM9CQ8IZT9 166 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 OR2L13Q8N349 312 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 OR4N2Q8NGD1 307 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 HOXB13Q92826 284 aaPredicted RBP13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 ZNF597Q96LX8 424 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 AMDHD1Q96NU7 426 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 CCT7Q99832 543 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 TP63Q9H3D4 680 aaPredicted RBP13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 FOLH1BQ9HBA9 442 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 PRODH2Q9UF12 536 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 ZDHHC2Q9UIJ5 367 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 C15orf41Q9Y2V0 281 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 FIS1Q9Y3D6 152 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 TRAF6Q9Y4K3 522 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 MYO7BQ6PIF6 2116 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 APCP25054 2843 aa13.35□□□□□ -0.27
PPP1CA-201ENST00000312989 TRGV5A0A0B4J1U4 118 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 TP53I11O14683 189 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 SEC22BO75396 215 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 CRCPO75575 148 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 SNX4O95219 450 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 JUNP05412 331 aaKnown RBP13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 HPNP05981 417 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 IFI6P09912 130 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 ESRRAP11474 423 aaPredicted RBP13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 NEFHP12036 1026 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 HTR1EP28566 365 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 SERPINB5P36952 375 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 MAP3K8P41279 467 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 KIR3DL1P43629 444 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 GAS1P54826 345 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 NRG3P56975 720 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 TFF3Q07654 80 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 PLCXD2Q0VAA5 305 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 SLC10A1Q14973 349 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 C6orf163Q5TEZ5 329 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 ANKRD26P1Q6NSI1 321 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 SEM1Q6ZVN7 128 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 CLYBLQ8N0X4 340 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 SLC34A3Q8N130 599 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 WDSUB1Q8N9V3 476 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 CDC26Q8NHZ8 85 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 NEIL3Q8TAT5 605 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 TMBIM1Q969X1 311 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 PKNOX2Q96KN3 472 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 GNRHR2Q96P88 292 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 ZIM3Q96PE6 472 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 TREX2Q9BQ50 279 aaPredicted RBP13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 C20orf27Q9GZN8 174 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 IQCGQ9H095 443 aaKnown RBP13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 ZNF395Q9H8N7 513 aaPredicted RBP13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 GALNT9Q9HCQ5 603 aa13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 C19orf53Q9UNZ5 99 aaPredicted RBP13.34□□□□□ -0.27
PPP1CA-201ENST00000312989 OR6C70A6NIJ9 312 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 C17orf51A8MQB3 221 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 CAPN14A8MX76 684 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 KDM4EB2RXH2 506 aaPredicted RBP13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 BCKDKO14874 412 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 SNPHO15079 494 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 RGS14O43566 566 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 ITM2AO43736 263 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 ERN1O75460 977 aaKnown RBP13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 BCAS2O75934 225 aaPredicted RBP13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 CLDN14O95500 239 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 MPIP34949 423 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 SERPINB4P48594 390 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 CDK9P50750 372 aaKnown RBP13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 NCBP2P52298 156 aaKnown RBP eCLIP13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 NUP107P57740 925 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 RPL38P63173 70 aaKnown RBP13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 CRYZQ08257 329 aaKnown RBP13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 KRT71Q3SY84 523 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 EXOSC6Q5RKV6 272 aaKnown RBP13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 SH2D4BQ5SQS7 431 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 TIGD3Q6B0B8 471 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 PAOXQ6QHF9 649 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 TMEM107Q6UX40 140 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 NUP54Q7Z3B4 507 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 OR5M9Q8NGP3 310 aa13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 CIDECQ96AQ7 238 aaPredicted RBP13.33□□□□□ -0.27
PPP1CA-201ENST00000312989 ELP4Q96EB1 424 aa13.33□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms