RNA–Protein interactions for RNA: ENST00000310190.8

CCS-201, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5 BASIC

Gene CCS, Length 942 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-201ENST00000310190 CLNS1AP54105 237 aaKnown RBP16.4■□□□□ 0.22
CCS-201ENST00000310190 MANFP55145 182 aaKnown RBP16.4■□□□□ 0.22
CCS-201ENST00000310190 PSG6Q00889 435 aa16.4■□□□□ 0.22
CCS-201ENST00000310190 SNTA1Q13424 505 aa16.4■□□□□ 0.22
CCS-201ENST00000310190 IGFBP7Q16270 282 aa16.4■□□□□ 0.22
CCS-201ENST00000310190 MAPKAPK3Q16644 382 aa16.4■□□□□ 0.22
CCS-201ENST00000310190 LSM12Q3MHD2 195 aaKnown RBP16.4■□□□□ 0.22
CCS-201ENST00000310190 CYP27C1Q4G0S4 372 aa16.4■□□□□ 0.22
CCS-201ENST00000310190 ZNF551Q7Z340 670 aaPredicted RBP16.4■□□□□ 0.22
CCS-201ENST00000310190 NUP54Q7Z3B4 507 aa16.4■□□□□ 0.22
CCS-201ENST00000310190 SLC34A3Q8N130 599 aa16.4■□□□□ 0.22
CCS-201ENST00000310190 ARFGAP2Q8N6H7 521 aa16.4■□□□□ 0.22
CCS-201ENST00000310190 KRTCAP2Q8N6L1 136 aa16.4■□□□□ 0.22
CCS-201ENST00000310190 OR7A2PQ8NGA2 310 aa16.4■□□□□ 0.22
CCS-201ENST00000310190 CIDECQ96AQ7 238 aaPredicted RBP16.4■□□□□ 0.22
CCS-201ENST00000310190 SLC35A4Q96G79 324 aa16.4■□□□□ 0.22
CCS-201ENST00000310190 FAM173AQ9BQD7 235 aa16.4■□□□□ 0.22
CCS-201ENST00000310190 CLMPQ9H6B4 373 aa16.4■□□□□ 0.22
CCS-201ENST00000310190 FOLH1BQ9HBA9 442 aa16.4■□□□□ 0.22
CCS-201ENST00000310190 PROK2Q9HC23 129 aa16.4■□□□□ 0.22
CCS-201ENST00000310190 NEUROD4Q9HD90 331 aa16.4■□□□□ 0.22
CCS-201ENST00000310190 PLSCR2Q9NRY7 297 aa16.4■□□□□ 0.22
CCS-201ENST00000310190 SIRT3Q9NTG7 399 aaPredicted RBP16.4■□□□□ 0.22
CCS-201ENST00000310190 DEPPQ9NTK1 212 aa16.4■□□□□ 0.22
CCS-201ENST00000310190 CNOT11Q9UKZ1 510 aaKnown RBP16.4■□□□□ 0.22
CCS-201ENST00000310190 VPS4AQ9UN37 437 aa16.4■□□□□ 0.22
CCS-201ENST00000310190 USH1CQ9Y6N9 552 aa16.4■□□□□ 0.22
CCS-201ENST00000310190 NINQ8N4C6 2090 aa16.4■□□□□ 0.22
CCS-201ENST00000310190 GTF3C1Q12789 2109 aa16.4■□□□□ 0.22
CCS-201ENST00000310190 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.39■□□□□ 0.21
CCS-201ENST00000310190 OR6C70A6NIJ9 312 aa16.39■□□□□ 0.21
CCS-201ENST00000310190 RNASET2O00584 256 aaKnown RBP16.39■□□□□ 0.21
CCS-201ENST00000310190 ERN1O75460 977 aaKnown RBP16.39■□□□□ 0.21
CCS-201ENST00000310190 ABCB1P08183 1280 aaPredicted RBP16.39■□□□□ 0.21
CCS-201ENST00000310190 EPHA3P29320 983 aa16.39■□□□□ 0.21
CCS-201ENST00000310190 RPP38P78345 283 aaKnown RBP16.39■□□□□ 0.21
CCS-201ENST00000310190 FOXO1Q12778 655 aa16.39■□□□□ 0.21
CCS-201ENST00000310190 GSTA3Q16772 222 aa16.39■□□□□ 0.21
CCS-201ENST00000310190 ANKRD26P1Q6NSI1 321 aa16.39■□□□□ 0.21
CCS-201ENST00000310190 TMEM107Q6UX40 140 aa16.39■□□□□ 0.21
CCS-201ENST00000310190 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.39■□□□□ 0.21
CCS-201ENST00000310190 GLB1L3Q8NCI6 653 aaPredicted RBP16.39■□□□□ 0.21
CCS-201ENST00000310190 OR2M7Q8NG81 312 aa16.39■□□□□ 0.21
CCS-201ENST00000310190 HGDQ93099 445 aa16.39■□□□□ 0.21
CCS-201ENST00000310190 MOAP1Q96BY2 351 aa16.39■□□□□ 0.21
CCS-201ENST00000310190 GIMAP5Q96F15 307 aa16.39■□□□□ 0.21
CCS-201ENST00000310190 DUSP26Q9BV47 211 aa16.39■□□□□ 0.21
CCS-201ENST00000310190 C3orf14Q9HBI5 128 aa16.39■□□□□ 0.21
CCS-201ENST00000310190 SLCO1B3Q9NPD5 702 aa16.39■□□□□ 0.21
CCS-201ENST00000310190 KLHL1Q9NR64 748 aa16.39■□□□□ 0.21
CCS-201ENST00000310190 DDX18Q9NVP1 670 aaKnown RBP16.39■□□□□ 0.21
CCS-201ENST00000310190 TMEM45AQ9NWC5 275 aa16.39■□□□□ 0.21
CCS-201ENST00000310190 USP9YO00507 2555 aaPredicted RBP16.38■□□□□ 0.21
CCS-201ENST00000310190 DNAJC13O75165 2243 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 A0A1W2PRB8 838 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 EMC8O43402 210 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 TSPAN2O60636 221 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 P04436 131 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 CCL3P10147 92 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 IDO1P14902 403 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 PTGER1P34995 402 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 PNLIPRP2P54317 469 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 WNT3P56703 355 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 LRRC74AQ0VAA2 488 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.38■□□□□ 0.21
CCS-201ENST00000310190 SLC9B1Q4ZJI4 515 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 PDCD4Q53EL6 469 aaKnown RBP16.38■□□□□ 0.21
CCS-201ENST00000310190 NPSR1Q6W5P4 371 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 GK5Q6ZS86 529 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 SPPL2AQ8TCT8 520 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 SFXN5Q8TD22 340 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 DYDC1Q8WWB3 177 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 SIKE1Q9BRV8 207 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 CCDC28BQ9BUN5 200 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 ANGPTL4Q9BY76 406 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 DPY30Q9C005 99 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 TRIM4Q9C037 500 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 CCDC134Q9H6E4 229 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 WDR55Q9H6Y2 383 aaPredicted RBP16.38■□□□□ 0.21
CCS-201ENST00000310190 ZDHHC11Q9H8X9 412 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 SDR39U1Q9NRG7 319 aaPredicted RBP16.38■□□□□ 0.21
CCS-201ENST00000310190 QPCTLQ9NXS2 382 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 MARCOQ9UEW3 520 aaPredicted RBP16.38■□□□□ 0.21
CCS-201ENST00000310190 ZNF407Q9C0G0 2248 aa16.38■□□□□ 0.21
CCS-201ENST00000310190 PTPN13Q12923 2485 aa16.37■□□□□ 0.21
CCS-201ENST00000310190 SPTAN1Q13813 2472 aaKnown RBP16.37■□□□□ 0.21
CCS-201ENST00000310190 NKX2-2O95096 273 aa16.37■□□□□ 0.21
CCS-201ENST00000310190 SNX4O95219 450 aa16.37■□□□□ 0.21
CCS-201ENST00000310190 KITP10721 976 aa16.37■□□□□ 0.21
CCS-201ENST00000310190 MST1P26927 711 aa16.37■□□□□ 0.21
CCS-201ENST00000310190 MEOX1P50221 254 aa16.37■□□□□ 0.21
CCS-201ENST00000310190 CDK9P50750 372 aaKnown RBP16.37■□□□□ 0.21
CCS-201ENST00000310190 PRR5P85299 388 aa16.37■□□□□ 0.21
CCS-201ENST00000310190 RNFT1Q5M7Z0 435 aa16.37■□□□□ 0.21
CCS-201ENST00000310190 AP1ARQ63HQ0 302 aa16.37■□□□□ 0.21
CCS-201ENST00000310190 CDRT4Q8N9R6 151 aa16.37■□□□□ 0.21
CCS-201ENST00000310190 OR10G3Q8NGC4 313 aa16.37■□□□□ 0.21
CCS-201ENST00000310190 GOT1L1Q8NHS2 421 aaPredicted RBP16.37■□□□□ 0.21
CCS-201ENST00000310190 PPP1R36Q96LQ0 422 aa16.37■□□□□ 0.21
CCS-201ENST00000310190 GPR137Q96N19 417 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms