RNA–Protein interactions for RNA: ENST00000309964.8

CLOCK-201, Transcript of clock circadian regulator, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLOCK, Length 10,304 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLOCK-201ENST00000309964 USP3Q9Y6I4 520 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 PCNX2A6NKB5 2137 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 GGT3PA6NGU5 568 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 RNASET2O00584 256 aaKnown RBP3.03□□□□□ -1.92
CLOCK-201ENST00000309964 UGT1A9O60656 530 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 C8orf89P0DMQ9 161 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 ACPPP15309 386 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 NDUFV2P19404 249 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 CD27P26842 260 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 GABRA3P34903 492 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 BMI1P35226 326 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 DCTP40126 519 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 ERVK-16P61578 105 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 TEKQ02763 1124 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 BCL2A1Q16548 175 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 C4orf46Q504U0 113 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 AHSA2Q719I0 299 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 CCDC116Q8IYX3 515 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 OR13C4Q8NGS5 318 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 OIT3Q8WWZ8 545 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 TMEM80Q96HE8 168 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 SLC46A1Q96NT5 459 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 MYADMQ96S97 322 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 PCDHB18PQ96TA0 734 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 NTMT1Q9BV86 223 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 BTBD2Q9BX70 525 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 SEMA6CQ9H3T2 930 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 C1orf198Q9H425 327 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 UGT1A7Q9HAW7 530 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 UGT1A10Q9HAW8 530 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 UGT1A8Q9HAW9 530 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 MALT1Q9UDY8 824 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 PLEKHM1Q9Y4G2 1056 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 ABCA4P78363 2273 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 DLEC1Q9Y238 1755 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 ZNF646O15015 1829 aaPredicted RBP3.03□□□□□ -1.92
CLOCK-201ENST00000309964 CPSF4LA6NMK7 179 aaKnown RBP3.03□□□□□ -1.92
CLOCK-201ENST00000309964 B8ZZF3 427 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 HHLA1C9JL84 531 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 M0QX08 132 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 TCN2P20062 427 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 PRLHRP49683 370 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 ENTPD1P49961 510 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 NOVA1P51513 510 aaKnown RBP3.03□□□□□ -1.92
CLOCK-201ENST00000309964 EPHA4P54764 986 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 SLC25A3Q00325 362 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 ZNF267Q14586 743 aaPredicted RBP3.03□□□□□ -1.92
CLOCK-201ENST00000309964 DEFB134Q4QY38 66 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 NDUFAF5Q5TEU4 345 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 LPCAT3Q6P1A2 487 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 HACD2Q6Y1H2 254 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 TSPYL5Q86VY4 417 aaPredicted RBP3.03□□□□□ -1.92
CLOCK-201ENST00000309964 LGI4Q8N135 537 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 SIX5Q8N196 739 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 RBM15BQ8NDT2 890 aaKnown RBP3.03□□□□□ -1.92
CLOCK-201ENST00000309964 SLC7A13Q8TCU3 470 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 FCAMRQ8WWV6 532 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 PHYHIPQ92561 330 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 SNAPC3Q92966 411 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 HSPBAP1Q96EW2 488 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 PTPN18Q99952 460 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 APOBEC3GQ9HC16 384 aaKnown RBP3.03□□□□□ -1.92
CLOCK-201ENST00000309964 RXFP3Q9NSD7 469 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 HIF3AQ9Y2N7 669 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 ATG4BQ9Y4P1 393 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 TMEM184BQ9Y519 407 aaPredicted RBP3.03□□□□□ -1.92
CLOCK-201ENST00000309964 J3KR12 359 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 CREB1P16220 341 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 GLB1P16278 677 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 ATF4P18848 351 aaPredicted RBP3.03□□□□□ -1.92
CLOCK-201ENST00000309964 ELAVL4P26378 380 aaKnown RBP3.03□□□□□ -1.92
CLOCK-201ENST00000309964 HTR1EP28566 365 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 OTX2P32243 289 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 IDH3AP50213 366 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 OR12D2P58182 307 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 CSTF1Q05048 431 aaKnown RBP3.03□□□□□ -1.92
CLOCK-201ENST00000309964 DAG1Q14118 895 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 PON2Q15165 354 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 RABL3Q5HYI8 236 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 ZNF678Q5SXM1 525 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 DGLUCYQ7Z3D6 616 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 DPPA2Q7Z7J5 298 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 ANKRD46Q86W74 232 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 UEVLDQ8IX04 471 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 CADM4Q8NFZ8 388 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 OR9K2Q8NGE7 335 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 SCGB1C1Q8TD33 95 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 RSC1A1Q92681 617 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 NMD3Q96D46 503 aaKnown RBP3.03□□□□□ -1.92
CLOCK-201ENST00000309964 PIGQQ9BRB3 760 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 MECRQ9BV79 373 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 FAM118AQ9NWS6 357 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 GALPQ9UBC7 116 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 POMPQ9Y244 141 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 KCNK6Q9Y257 313 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 TP53TG5Q9Y2B4 290 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 GTF3C1Q12789 2109 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 KANTRA0A1W2PQU2 76 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 PRSS38A1L453 326 aa3.03□□□□□ -1.92
CLOCK-201ENST00000309964 TRAPPC13A5PLN9 417 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms