RNA–Protein interactions for RNA: ENST00000309469.8

ATG4D-201, Transcript of autophagy related 4D cysteine peptidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATG4D, Length 1,949 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-201ENST00000309469 FGD3Q5JSP0 725 aa19.88■□□□□ 0.77
ATG4D-201ENST00000309469 GARNL3Q5VVW2 1013 aa19.88■□□□□ 0.77
ATG4D-201ENST00000309469 MLIPQ5VWP3 458 aa19.88■□□□□ 0.77
ATG4D-201ENST00000309469 ZNF770Q6IQ21 691 aaPredicted RBP19.88■□□□□ 0.77
ATG4D-201ENST00000309469 CCDC71Q8IV32 467 aaPredicted RBP19.88■□□□□ 0.77
ATG4D-201ENST00000309469 AQP11Q8NBQ7 271 aa19.88■□□□□ 0.77
ATG4D-201ENST00000309469 BPIFB6Q8NFQ5 453 aa19.88■□□□□ 0.77
ATG4D-201ENST00000309469 MAFAQ8NHW3 353 aaPredicted RBP19.88■□□□□ 0.77
ATG4D-201ENST00000309469 ZNF566Q969W8 418 aa19.88■□□□□ 0.77
ATG4D-201ENST00000309469 RSL24D1Q9UHA3 163 aaKnown RBP19.88■□□□□ 0.77
ATG4D-201ENST00000309469 IGHV1OR21-1A0A087WYE8 117 aa19.87■□□□□ 0.77
ATG4D-201ENST00000309469 SYT5O00445 386 aa19.87■□□□□ 0.77
ATG4D-201ENST00000309469 ZIC2O95409 532 aaPredicted RBP19.87■□□□□ 0.77
ATG4D-201ENST00000309469 NSA2O95478 260 aaKnown RBP19.87■□□□□ 0.77
ATG4D-201ENST00000309469 ANGPTL1O95841 491 aa19.87■□□□□ 0.77
ATG4D-201ENST00000309469 GASTP01350 101 aa19.87■□□□□ 0.77
ATG4D-201ENST00000309469 GIMD1P0DJR0 217 aa19.87■□□□□ 0.77
ATG4D-201ENST00000309469 ELAVL4P26378 380 aaKnown RBP19.87■□□□□ 0.77
ATG4D-201ENST00000309469 SH3BGRP55822 239 aaPredicted RBP19.87■□□□□ 0.77
ATG4D-201ENST00000309469 ARHGAP11BQ3KRB8 267 aa19.87■□□□□ 0.77
ATG4D-201ENST00000309469 ZBED5Q49AG3 693 aa19.87■□□□□ 0.77
ATG4D-201ENST00000309469 TCTE1Q5JU00 501 aa19.87■□□□□ 0.77
ATG4D-201ENST00000309469 EXOSC6Q5RKV6 272 aaKnown RBP19.87■□□□□ 0.77
ATG4D-201ENST00000309469 DCST1Q5T197 706 aa19.87■□□□□ 0.77
ATG4D-201ENST00000309469 LYSMD4Q5XG99 296 aa19.87■□□□□ 0.77
ATG4D-201ENST00000309469 VRK2Q86Y07 508 aa19.87■□□□□ 0.77
ATG4D-201ENST00000309469 SLC35F3Q8IY50 421 aa19.87■□□□□ 0.77
ATG4D-201ENST00000309469 OR6T1Q8NGN1 323 aa19.87■□□□□ 0.77
ATG4D-201ENST00000309469 GTPBP3Q969Y2 492 aaKnown RBP19.87■□□□□ 0.77
ATG4D-201ENST00000309469 PIGUQ9H490 435 aa19.87■□□□□ 0.77
ATG4D-201ENST00000309469 POLR1BQ9H9Y6 1135 aa19.87■□□□□ 0.77
ATG4D-201ENST00000309469 PCDHGA6Q9Y5G7 932 aa19.87■□□□□ 0.77
ATG4D-201ENST00000309469 EML5Q05BV3 1969 aa19.87■□□□□ 0.77
ATG4D-201ENST00000309469 CCDC88CQ9P219 2028 aa19.87■□□□□ 0.77
ATG4D-201ENST00000309469 ABCB7O75027 752 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 CT62P0C5K7 136 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 POU2F1P14859 743 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 MAPK10P53779 464 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 NUP107P57740 925 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 PIN1Q13526 163 aaPredicted RBP19.86■□□□□ 0.77
ATG4D-201ENST00000309469 MAD2L1BPQ15013 274 aaPredicted RBP19.86■□□□□ 0.77
ATG4D-201ENST00000309469 ZCCHC12Q6PEW1 402 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 FRRS1Q6ZNA5 592 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 Q6ZPB1 254 aaPredicted RBP19.86■□□□□ 0.77
ATG4D-201ENST00000309469 SGCDQ92629 289 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 CTHRC1Q96CG8 243 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 PEX11GQ96HA9 241 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 RBCK1Q9BYM8 510 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 SPRTNQ9H040 489 aaPredicted RBP19.86■□□□□ 0.77
ATG4D-201ENST00000309469 MTHFD2LQ9H903 347 aaPredicted RBP19.86■□□□□ 0.77
ATG4D-201ENST00000309469 VCX3AQ9NNX9 186 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 AASSQ9UDR5 926 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 FAAHO00519 579 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 OXSR1O95747 527 aaPredicted RBP19.86■□□□□ 0.77
ATG4D-201ENST00000309469 ALOX5P09917 674 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 GLB1P16278 677 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 DHPSP49366 369 aaPredicted RBP19.86■□□□□ 0.77
ATG4D-201ENST00000309469 CXCR4P61073 352 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 SEC23BQ15437 767 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 SHBQ15464 509 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 INAVAQ3KP66 663 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 CWF19L1Q69YN2 538 aaKnown RBP19.86■□□□□ 0.77
ATG4D-201ENST00000309469 B3GNT8Q7Z7M8 397 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 PARP8Q8N3A8 854 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 CDRT4Q8N9R6 151 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 OR6C4Q8NGE1 309 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 OR52P1PQ8NH57 321 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 ELF4Q99607 663 aaPredicted RBP19.86■□□□□ 0.77
ATG4D-201ENST00000309469 TRIM45Q9H8W5 580 aaPredicted RBP19.86■□□□□ 0.77
ATG4D-201ENST00000309469 SLC13A4Q9UKG4 626 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 MKLN1Q9UL63 735 aa19.86■□□□□ 0.77
ATG4D-201ENST00000309469 FITM1A5D6W6 292 aa19.85■□□□□ 0.77
ATG4D-201ENST00000309469 OR10H2O60403 315 aa19.85■□□□□ 0.77
ATG4D-201ENST00000309469 UGT2B17O75795 530 aa19.85■□□□□ 0.77
ATG4D-201ENST00000309469 PDGFBP01127 241 aaPredicted RBP19.85■□□□□ 0.77
ATG4D-201ENST00000309469 PRKAR1BP31321 381 aa19.85■□□□□ 0.77
ATG4D-201ENST00000309469 FMO3P31513 532 aa19.85■□□□□ 0.77
ATG4D-201ENST00000309469 GGT2P36268 569 aa19.85■□□□□ 0.77
ATG4D-201ENST00000309469 MAT1AQ00266 395 aaKnown RBP19.85■□□□□ 0.77
ATG4D-201ENST00000309469 BNC1Q01954 994 aa19.85■□□□□ 0.77
ATG4D-201ENST00000309469 PMS2P3Q13401 168 aa19.85■□□□□ 0.77
ATG4D-201ENST00000309469 EXOSC7Q15024 291 aaKnown RBP19.85■□□□□ 0.77
ATG4D-201ENST00000309469 NPTX1Q15818 432 aa19.85■□□□□ 0.77
ATG4D-201ENST00000309469 DHRS4L2Q6PKH6 230 aa19.85■□□□□ 0.77
ATG4D-201ENST00000309469 DGAT2L6Q6ZPD8 337 aa19.85■□□□□ 0.77
ATG4D-201ENST00000309469 ALDH16A1Q8IZ83 802 aa19.85■□□□□ 0.77
ATG4D-201ENST00000309469 ADAMTS18Q8TE60 1221 aa19.85■□□□□ 0.77
ATG4D-201ENST00000309469 UBE2FQ969M7 185 aa19.85■□□□□ 0.77
ATG4D-201ENST00000309469 ARHGDIGQ99819 225 aa19.85■□□□□ 0.77
ATG4D-201ENST00000309469 FUZQ9BT04 418 aa19.85■□□□□ 0.77
ATG4D-201ENST00000309469 FNDC11Q9BVV2 318 aa19.85■□□□□ 0.77
ATG4D-201ENST00000309469 ENOPH1Q9UHY7 261 aa19.85■□□□□ 0.77
ATG4D-201ENST00000309469 MRPS33Q9Y291 106 aaKnown RBP19.85■□□□□ 0.77
ATG4D-201ENST00000309469 WDR45Q9Y484 360 aa19.85■□□□□ 0.77
ATG4D-201ENST00000309469 A0A1W2PRQ8 180 aa19.84■□□□□ 0.77
ATG4D-201ENST00000309469 BLACEA4D250 179 aa19.84■□□□□ 0.77
ATG4D-201ENST00000309469 PTGES3LE9PB15 166 aa19.84■□□□□ 0.77
ATG4D-201ENST00000309469 XPNPEP2O43895 674 aa19.84■□□□□ 0.77
ATG4D-201ENST00000309469 CTNSO60931 367 aa19.84■□□□□ 0.77
ATG4D-201ENST00000309469 GNSP15586 552 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms