RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 SLC30A6Q6NXT4 461 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 RNF44Q7L0R7 432 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 TRIM46Q7Z4K8 759 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 TMC8Q8IU68 726 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 DNAJB8Q8NHS0 232 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 USP7Q93009 1102 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 MAGEB10Q96LZ2 347 aaPredicted RBP11.98□□□□□ -0.49
RETREG3-201ENST00000309428 FUZQ9BT04 418 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 FXYD6Q9H0Q3 95 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 TAS2R7Q9NYW3 318 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 HCN3Q9P1Z3 774 aa11.98□□□□□ -0.49
RETREG3-201ENST00000309428 A0A1W2PS29 197 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 CIB4A0PJX0 185 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 DDCP20711 480 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 OC90Q02509 493 aaPredicted RBP11.97□□□□□ -0.49
RETREG3-201ENST00000309428 NNATQ16517 81 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 LAIR2Q6ISS4 152 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 ABI3BPQ7Z7G0 1075 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 COMMD7Q86VX2 200 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 PARGQ86W56 976 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 LACC1Q8IV20 430 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 OR9A1PQ8NGU1 263 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 PDLIM5Q96HC4 596 aaKnown RBP11.97□□□□□ -0.49
RETREG3-201ENST00000309428 ZCCHC2Q9C0B9 1178 aaKnown RBP11.97□□□□□ -0.49
RETREG3-201ENST00000309428 VPS13AQ96RL7 3174 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 TDRD6O60522 2096 aaKnown RBP11.97□□□□□ -0.49
RETREG3-201ENST00000309428 FAM170BA6NMN3 283 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 FAM25EA8MYX2 175 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 SYPP08247 313 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 PRKACAP17612 351 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 AK4P27144 223 aaPredicted RBP11.97□□□□□ -0.49
RETREG3-201ENST00000309428 RPS25P62851 125 aaKnown RBP11.97□□□□□ -0.49
RETREG3-201ENST00000309428 ADAM15Q13444 863 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 ATXN7L3Q14CW9 347 aaPredicted RBP11.97□□□□□ -0.49
RETREG3-201ENST00000309428 SLC25A25Q6KCM7 469 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 ZC3H14Q6PJT7 736 aaKnown RBP11.97□□□□□ -0.49
RETREG3-201ENST00000309428 SLC38A6Q8IZM9 456 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 OR4F15Q8NGB8 312 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 BRD7Q9NPI1 651 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 TEX10Q9NXF1 929 aaPredicted RBP11.97□□□□□ -0.49
RETREG3-201ENST00000309428 FBXL12Q9NXK8 326 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 INSL6Q9Y581 213 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 RP1P56715 2156 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 MED12Q93074 2177 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 ASXL3Q9C0F0 2248 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 DAPL1A0PJW8 107 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 CAPN5O15484 640 aaPredicted RBP11.97□□□□□ -0.49
RETREG3-201ENST00000309428 NDUFS4O43181 175 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 PRMT3O60678 531 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 REM1O75628 298 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 CDC123O75794 336 aaPredicted RBP11.97□□□□□ -0.49
RETREG3-201ENST00000309428 ARHGEF15O94989 841 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 ADH1CP00326 375 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 RB1P06400 928 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 FCN2Q15485 313 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 CXXC5Q7LFL8 322 aaKnown RBP11.97□□□□□ -0.49
RETREG3-201ENST00000309428 C16orf78Q8WTQ4 265 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 ZBP1Q9H171 429 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 C11orf49Q9H6J7 331 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 CSNK1G3Q9Y6M4 447 aa11.97□□□□□ -0.49
RETREG3-201ENST00000309428 ANHXE9PGG2 379 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 M0R233 179 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 GDI1P31150 447 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 HOXA9P31269 272 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 NCBP2P52298 156 aaKnown RBP eCLIP11.96□□□□□ -0.492e-8■■■■□ 22.1
RETREG3-201ENST00000309428 ARHGDIBP52566 201 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 P2RX3P56373 397 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 TAP2Q03519 686 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 HSF2Q03933 536 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 SYPL1Q16563 259 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 REEP3Q6NUK4 255 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 PTOV1Q86YD1 416 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 FTMTQ8N4E7 242 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 OXR1Q8N573 874 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 MRPL43Q8N983 215 aaKnown RBP11.96□□□□□ -0.49
RETREG3-201ENST00000309428 OR4K5Q8NGD3 323 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 OR51L1Q8NGJ5 315 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 OR8J1Q8NGP2 316 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 FATE1Q969F0 183 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 TMEM19Q96HH6 336 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 EVA1BQ9NVM1 165 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 NDRG2Q9UN36 371 aaKnown RBP11.96□□□□□ -0.49
RETREG3-201ENST00000309428 MAN2B2Q9Y2E5 1009 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 ENPP4Q9Y6X5 453 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 A0A075B6Q4 140 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 PRKNO60260 465 aaPredicted RBP11.96□□□□□ -0.49
RETREG3-201ENST00000309428 STX11O75558 287 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 PRNPP04156 253 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 C1GALT1C1LP0DN25 315 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 ADRB3P13945 408 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 NPPBP16860 134 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 HOXB6P17509 224 aaKnown RBP11.96□□□□□ -0.49
RETREG3-201ENST00000309428 NAT1P18440 290 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 GPR4P46093 362 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 PNLIPRP1P54315 467 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 SMIM11AP58511 58 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 SLC7A9P82251 487 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 PLEKHS1Q5SXH7 462 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 ZNF783Q6ZMS7 281 aa11.96□□□□□ -0.49
RETREG3-201ENST00000309428 SERPINA11Q86U17 422 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms