RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 NRG3P56975 720 aa18.13■□□□□ 0.49
PDZRN3-202ENST00000308537 CORO7P57737 925 aa18.13■□□□□ 0.49
PDZRN3-202ENST00000308537 UGT3A2Q3SY77 523 aa18.13■□□□□ 0.49
PDZRN3-202ENST00000308537 SEM1Q6ZVN7 128 aa18.13■□□□□ 0.49
PDZRN3-202ENST00000308537 CAVIN3Q969G5 261 aa18.13■□□□□ 0.49
PDZRN3-202ENST00000308537 TTYH2Q9BSA4 534 aa18.13■□□□□ 0.49
PDZRN3-202ENST00000308537 MECRQ9BV79 373 aa18.13■□□□□ 0.49
PDZRN3-202ENST00000308537 NPDC1Q9NQX5 325 aaPredicted RBP18.13■□□□□ 0.49
PDZRN3-202ENST00000308537 C15orf41Q9Y2V0 281 aa18.13■□□□□ 0.49
PDZRN3-202ENST00000308537 OTOGQ6ZRI0 2925 aa18.13■□□□□ 0.49
PDZRN3-202ENST00000308537 CCDC168Q8NDH2 2452 aa18.13■□□□□ 0.49
PDZRN3-202ENST00000308537 PCNX3Q9H6A9 2034 aa18.13■□□□□ 0.49
PDZRN3-202ENST00000308537 TRIM13O60858 407 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 SNX4O95219 450 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 PTPN6P29350 595 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 ALDH3A1P30838 453 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 ADH7P40394 386 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 CDK9P50750 372 aaKnown RBP18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 DCAF7P61962 342 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 CRYZQ08257 329 aaKnown RBP18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 C2orf80Q0P641 193 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 PMPCAQ10713 525 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 CFAP157Q5JU67 520 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 SPDYAQ5MJ70 313 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 KANK2Q63ZY3 851 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 TIGD3Q6B0B8 471 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 TMEM211Q6ICI0 200 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 NOXRED1Q6NXP6 359 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 EMBQ6PCB8 327 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 NUP54Q7Z3B4 507 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 CCDC71Q8IV32 467 aaPredicted RBP18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 SAMD14Q8IZD0 417 aaPredicted RBP18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 CCDC63Q8NA47 563 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 OR6Y1Q8NGX8 325 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 LILRB4Q8NHJ6 448 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 SARAFQ96BY9 339 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 SLC35A4Q96G79 324 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 METTL2AQ96IZ6 378 aaKnown RBP18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 JSRP1Q96MG2 331 aaPredicted RBP18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 GNRHR2Q96P88 292 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 FAM111AQ96PZ2 611 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 PRODH2Q9UF12 536 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 PCDHGB3Q9Y5G1 929 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 DNAJC15Q9Y5T4 150 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 V9GYY5 206 aaPredicted RBP18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 SPG11Q96JI7 2443 aa18.12■□□□□ 0.49
PDZRN3-202ENST00000308537 ANKHD1Q8IWZ3 2542 aaKnown RBP18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 FIGNL2A6NMB9 653 aa18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 KDM4EB2RXH2 506 aaPredicted RBP18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 TMEM233B4DJY2 109 aa18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 AZIN1O14977 448 aa18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 TSPAN2O60636 221 aa18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 TOXO94900 526 aa18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 SNRPB2P08579 225 aaKnown RBP18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 PTGER4P35408 488 aa18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 PSG6Q00889 435 aa18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 PLCXD2Q0VAA5 305 aa18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 TMEM198Q66K66 360 aa18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 ZNF585AQ6P3V2 769 aa18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 LURAP1LQ8IV03 231 aa18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 SRRM1Q8IYB3 904 aaKnown RBP18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 CA5BP1Q8WTZ4 195 aa18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 RND1Q92730 232 aa18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 TMBIM1Q969X1 311 aa18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 TRMOQ9BU70 441 aa18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 TMEM109Q9BVC6 243 aa18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 UCK2Q9BZX2 261 aa18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 ROPN1BQ9BZX4 212 aaPredicted RBP18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 GLIPR2Q9H4G4 154 aa18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 ROPN1Q9HAT0 212 aaPredicted RBP18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 FOLH1BQ9HBA9 442 aa18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 GALNT9Q9HCQ5 603 aa18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 WBP11Q9Y2W2 641 aaKnown RBP18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 DOCK7Q96N67 2140 aa18.11■□□□□ 0.49
PDZRN3-202ENST00000308537 A0A087WV62 115 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 A0A0G2JNJ9 132 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 OR6C70A6NIJ9 312 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 SNPHO15079 494 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 TYROBPO43914 113 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 WDR1O75083 606 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 ICOSLGO75144 302 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 SPAG7O75391 227 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 FGF4P08620 206 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 GDF1P27539 372 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 CHRNB4P30926 498 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 ETV4P43268 484 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 TRPC1P48995 793 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 IMPG1Q17R60 797 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 B3GNT6Q6ZMB0 384 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 LIX1LQ8IVB5 337 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 FAM9CQ8IZT9 166 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 MREGQ8N565 214 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 WDSUB1Q8N9V3 476 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 OR4N2Q8NGD1 307 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 TCP10LQ8TDR4 215 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 ASB5Q8WWX0 329 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 ZNF764Q96H86 408 aaPredicted RBP18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 SPOCK3Q9BQ16 436 aa18.1■□□□□ 0.49
PDZRN3-202ENST00000308537 LDAHQ9H6V9 325 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms