RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 LGI1O95970 557 aa9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 HOXB3P14651 431 aaPredicted RBP9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 CRYBB2P43320 205 aa9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 MVDP53602 400 aa9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 CRISP1P54107 249 aa9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 HYAL2Q12891 473 aa9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 EFR3AQ14156 821 aa9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 NCF4Q15080 339 aa9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 GLYR1Q49A26 553 aaPredicted RBP9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 TMEM201Q5SNT2 666 aa9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 ADNP2Q6IQ32 1131 aa9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 TMEM65Q6PI78 240 aa9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 CDH24Q86UP0 819 aa9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 FAM46DQ8NEK8 389 aa9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 OR9Q2Q8NGE9 314 aa9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 OR52J3Q8NH60 311 aa9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 HMGB4Q8WW32 186 aa9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 GEMIN6Q8WXD5 167 aaKnown RBP9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 DACT3Q96B18 629 aaPredicted RBP9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 COX14Q96I36 57 aa9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 UCK2Q9BZX2 261 aa9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 ZCCHC2Q9C0B9 1178 aaKnown RBP9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 OSGEPL1Q9H4B0 414 aa9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 TMEM38AQ9H6F2 299 aa9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 WDR26Q9H7D7 661 aa9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 STOX2Q9P2F5 926 aaPredicted RBP9.75□□□□□ -0.85
APOBEC3F-201ENST00000308521 TCRBV21S2A2A0A5A6 115 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 POM121BA6NF01 834 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 PRAMEF25A6NGN4 478 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 MEN1O00255 615 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 TFECO14948 347 aaPredicted RBP9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 NPC1O15118 1278 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 RGS5O15539 181 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 OR2B3O76000 313 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 C1orf105O95561 183 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 IFNA14P01570 189 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 ACP5P13686 325 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 NDUFV2P19404 249 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 PSMA1P25786 263 aaKnown RBP9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 IMPA1P29218 277 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 POLR2GP62487 172 aaKnown RBP eCLIP9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 RAE1P78406 368 aaKnown RBP9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 IRF8Q02556 426 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 RUNX1T1Q06455 604 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 TP53BP2Q13625 1128 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 DDX39BQ13838 428 aaKnown RBP9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 ZNF658BQ4V348 819 aaPredicted RBP9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 CRB2Q5IJ48 1285 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 GCNT6Q5T4J0 391 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 FRMPD2BQ6IN97 320 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 AMZ2Q86W34 360 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 THOC6Q86W42 341 aaKnown RBP9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 RASGRP3Q8IV61 690 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 VWA5B2Q8N398 1253 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 DTX3Q8N9I9 347 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 TP53I13Q8NBR0 393 aaPredicted RBP9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 OR52N2Q8NGI0 321 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 OR4A15Q8NGL6 344 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 OR5AR1Q8NGP9 310 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 VANGL1Q8TAA9 524 aaPredicted RBP9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 FAM3CQ92520 227 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 FOPNLQ96NB1 174 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 OR4K3Q96R72 315 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 BHLHE41Q9C0J9 482 aaPredicted RBP9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 NDOR1Q9UHB4 597 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 SLC6A14Q9UN76 642 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 STUB1Q9UNE7 303 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 KCNK6Q9Y257 313 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 ASF1AQ9Y294 204 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 DSPPQ9NZW4 1301 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 NUP214P35658 2090 aaPredicted RBP9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 A0A1W2PQ09 198 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 HYKKA2RU49 373 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 CCDC182A6NF36 153 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 E7EQ34 232 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 H0YIV9 168 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 HAX1O00165 279 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 PCDH17O14917 1159 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 OR5F1O95221 314 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 CATP04040 527 aaKnown RBP9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 CD22P20273 847 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 TNFRSF1BP20333 461 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 DRD1P21728 446 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 RPS21P63220 83 aaKnown RBP9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 EEF1A2Q05639 463 aaKnown RBP9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 SCARB2Q14108 478 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 DOC2BQ14184 412 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 SF1Q15637 639 aaKnown RBP9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 TSC22D1Q15714 1073 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 TAB1Q15750 504 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 ADAMTSL4Q6UY14 1074 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 ZNF600Q6ZNG1 722 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 FAM92BQ6ZTR7 304 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 RD3Q7Z3Z2 195 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 ADGRG3Q86Y34 549 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 KLHDC8AQ8IYD2 350 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 GDPD1Q8N9F7 314 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 OR2L2Q8NH16 312 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 ZNF480Q8WV37 535 aa9.74□□□□□ -0.85
APOBEC3F-201ENST00000308521 KIAA1143Q96AT1 154 aaPredicted RBP9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms