RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 ZNF761Q86XN6 746 aaPredicted RBP15.12■□□□□ 0.01
USP42-201ENST00000306177 FOXRED2Q8IWF2 684 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 CDRT4Q8N9R6 151 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 OR52E2Q8NGJ4 325 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 LRRC20Q8TCA0 184 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 PROKR1Q8TCW9 393 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 NAA11Q9BSU3 229 aaPredicted RBP15.12■□□□□ 0.01
USP42-201ENST00000306177 PRSS21Q9Y6M0 314 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 OR52A4PA6NMU1 304 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 POLR1CO15160 346 aaPredicted RBP15.12■□□□□ 0.01
USP42-201ENST00000306177 PRKYO43930 277 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 CCR7P32248 378 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 ADRA1AP35348 466 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 ACVR1BP36896 505 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 FRKP42685 505 aaPredicted RBP15.12■□□□□ 0.01
USP42-201ENST00000306177 CCINQ13939 588 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 TAZQ16635 292 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 CMPK2Q5EBM0 449 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 RPS26P11Q5JNZ5 115 aaPredicted RBP15.12■□□□□ 0.01
USP42-201ENST00000306177 METTL25Q8N6Q8 603 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 OR8S1Q8NH09 359 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 OR2L2Q8NH16 312 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 TESCQ96BS2 214 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 TJP1Q07157 1748 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 PHYHO14832 338 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 HBQ1P09105 142 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 ADH7P40394 386 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 P2RY2P41231 377 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 IST1P53990 364 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 SERTAD2Q14140 314 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 TMEM69Q5SWH9 247 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 RAET1LQ5VY80 246 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 DENND6BQ8NEG7 585 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 ELP5Q8TE02 316 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 DNAJA3Q96EY1 480 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 ZIC5Q96T25 663 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 ACPTQ9BZG2 426 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 WASF3Q9UPY6 502 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 ALG5Q9Y673 324 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 ISPDA4D126 451 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 ARNTLO00327 626 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 RBBP9O75884 186 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 TNFRSF1BP20333 461 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 CNR2P34972 360 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 GK3PQ14409 553 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 KIR2DS3Q14952 304 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 FAM26DQ5JW98 314 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 MAMDC2Q7Z304 686 aaPredicted RBP15.12■□□□□ 0.01
USP42-201ENST00000306177 SERPINA11Q86U17 422 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 FGF13Q92913 245 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 LPAR4Q99677 370 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 FUNDC2Q9BWH2 189 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 ACTR10Q9NZ32 417 aa15.12■□□□□ 0.01
USP42-201ENST00000306177 TRAV6A0A075B6T7 132 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 A0A1W2PPK0 400 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 CD8B2A6NJW9 211 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 SDC3O75056 442 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 SNAPC5O75971 98 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 ATXN1LP0C7T5 689 aaKnown RBP15.11■□□□□ 0.01
USP42-201ENST00000306177 CD8BP10966 210 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 DCTP40126 519 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 RIDAP52758 137 aaKnown RBP15.11■□□□□ 0.01
USP42-201ENST00000306177 MRPL49Q13405 166 aaKnown RBP15.11■□□□□ 0.01
USP42-201ENST00000306177 FAM69BQ5VUD6 431 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 CARD17Q5XLA6 110 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 IL22RA1Q8N6P7 574 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 OR2T4Q8NH00 348 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 RPLP0P6Q8NHW5 317 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 BIRC8Q96P09 236 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 ATOH8Q96SQ7 321 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 ANKRD60Q9BZ19 345 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 NMNAT1Q9HAN9 279 aaPredicted RBP15.11■□□□□ 0.01
USP42-201ENST00000306177 GLI3P10071 1580 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 GCAP28676 217 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 GRK5P34947 590 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 CTSCP53634 463 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 PNCKQ6P2M8 343 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 LRFN4Q6PJG9 635 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 TMPRSS12Q86WS5 348 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 RBM12BQ8IXT5 1001 aaKnown RBP15.11■□□□□ 0.01
USP42-201ENST00000306177 MS4A15Q8N5U1 240 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 WDR20Q8TBZ3 569 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 FRS2Q8WU20 508 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 GMEB1Q9Y692 573 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 DUS1LQ6P1R4 473 aaKnown RBP15.11■□□□□ 0.01
USP42-201ENST00000306177 KCTD9Q7L273 389 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 Q8N402 240 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 OR5T2Q8NGG2 359 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 AKAP1Q92667 903 aaKnown RBP eCLIP15.11■□□□□ 0.01
USP42-201ENST00000306177 CCDC120Q96HB5 630 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 MYNNQ9NPC7 610 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 VAPAQ9P0L0 249 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 LHX3Q9UBR4 397 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 CLCA1A8K7I4 914 aa15.11■□□□□ 0.01
USP42-201ENST00000306177 EEF1E1O43324 174 aaKnown RBP15.11■□□□□ 0.01
USP42-201ENST00000306177 ERCC1P07992 297 aaPredicted RBP15.11■□□□□ 0.01
USP42-201ENST00000306177 ZNF888P0CJ79 500 aaPredicted RBP15.11■□□□□ 0.01
USP42-201ENST00000306177 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.11■□□□□ 0.01
USP42-201ENST00000306177 ZC3H14Q6PJT7 736 aaKnown RBP15.11■□□□□ 0.01
USP42-201ENST00000306177 Q6ZSR6 202 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms