RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 OR4C15Q8NGM1 316 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 POLDIP3Q9BY77 421 aaKnown RBP12.33□□□□□ -0.44
TRIM35-201ENST00000305364 GSX2Q9BZM3 304 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 KATNBL1Q9H079 304 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 OR10A4Q9H209 315 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 SPNS1Q9H2V7 528 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 BRF2Q9HAW0 419 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 AKAP7Q9P0M2 348 aaPredicted RBP12.33□□□□□ -0.44
TRIM35-201ENST00000305364 CSNK1G3Q9Y6M4 447 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 DPM1O60762 260 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 MT-ND4P03905 459 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 TCRBP04435 133 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 KELP23276 732 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 BLVRAP53004 296 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 TBPL1P62380 186 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 TAP2Q03519 686 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 LASP1Q14847 261 aaKnown RBP12.33□□□□□ -0.44
TRIM35-201ENST00000305364 GPR68Q15743 365 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 PGBD2Q6P3X8 592 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 RAB42Q8N4Z0 105 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 OR4M1Q8NGD0 313 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 CHTF18Q8WVB6 975 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 GIMAP1Q8WWP7 306 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 RAD51AP1Q96B01 352 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 TIFAQ96CG3 184 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 FAM46AQ96IP4 442 aaKnown RBP12.33□□□□□ -0.44
TRIM35-201ENST00000305364 OR2M2Q96R28 347 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 MED11Q9P086 117 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 ZNF840PA6NDX5 716 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 B4GALT3O60512 393 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 RGS9O75916 674 aaPredicted RBP12.33□□□□□ -0.44
TRIM35-201ENST00000305364 MRPL3P09001 348 aaKnown RBP12.33□□□□□ -0.44
TRIM35-201ENST00000305364 SOX18P35713 384 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 SLC1A3P43003 542 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 CCR6P51684 374 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 AANATQ16613 207 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 TMEM44Q2T9K0 475 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 PYHIN1Q6K0P9 492 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 LRRC28Q86X40 367 aaPredicted RBP12.33□□□□□ -0.44
TRIM35-201ENST00000305364 TNFAIP8L1Q8WVP5 186 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 MSLNLQ96KJ4 702 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 PKMYT1Q99640 499 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 TMEM5Q9Y2B1 443 aa12.33□□□□□ -0.44
TRIM35-201ENST00000305364 SCN2BO60939 215 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 SOCS5O75159 536 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 IGHA2P01877 340 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 CSNK1DP48730 415 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 SEC23BQ15437 767 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 BRAT1Q6PJG6 821 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 C3P1Q6ZMU1 363 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 PLPP6Q8IY26 295 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 ECHDC3Q96DC8 303 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 MARVELD1Q9BSK0 173 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 ARL6Q9H0F7 186 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 NEUROD4Q9HD90 331 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 FAM86C2PA6NEL3 165 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 H3BUI4 141 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 FRS3O43559 492 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 TFP02787 698 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 PROS1P07225 676 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 GABRB1P18505 474 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 ETV3P41162 512 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 BTG1P62324 171 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 PCDH1Q08174 1060 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 ELOAQ14241 798 aaKnown RBP12.32□□□□□ -0.44
TRIM35-201ENST00000305364 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.32□□□□□ -0.44
TRIM35-201ENST00000305364 ACBD7Q8N6N7 88 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 ZNF354BQ96LW1 612 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 TAPBPLQ9BX59 468 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 TMEM38AQ9H6F2 299 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 EMC7Q9NPA0 242 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 C1GALT1Q9NS00 363 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 A0A0B4J293 547 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 TRDV1A0A1B0GX56 115 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 FAM183AA6NL82 134 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 LGI1O95970 557 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 C1GALT1C1LP0DN25 315 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 SAGP10523 405 aaPredicted RBP12.32□□□□□ -0.44
TRIM35-201ENST00000305364 GPR4P46093 362 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 LIM2P55344 173 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 OCLNQ16625 522 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 ZNF311Q5JNZ3 666 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 FAM198BQ6UWH4 519 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 OLIG3Q7RTU3 272 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 DNAJB7Q7Z6W7 309 aaPredicted RBP12.32□□□□□ -0.44
TRIM35-201ENST00000305364 METTL3Q86U44 580 aaKnown RBP12.32□□□□□ -0.44
TRIM35-201ENST00000305364 OR5D16Q8NGK9 328 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 MOSPD2Q8NHP6 518 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 RNF31Q96EP0 1072 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 ZNF558Q96NG5 402 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 DEFB118Q96PH6 123 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 NDC1Q9BTX1 674 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 SPG21Q9NZD8 308 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 CFAP97Q9P2B7 532 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 FBXW2Q9UKT8 454 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 EXO1Q9UQ84 846 aaKnown RBP12.32□□□□□ -0.44
TRIM35-201ENST00000305364 GLOD5A6NK44 160 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 HEPACAM2A8MVW5 462 aa12.32□□□□□ -0.44
TRIM35-201ENST00000305364 ZNF821O75541 412 aaPredicted RBP12.32□□□□□ -0.44
TRIM35-201ENST00000305364 GATBO75879 557 aaKnown RBP12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms