RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 FSCN3Q9NQT6 498 aa13.57□□□□□ -0.24
SHCBP1-201ENST00000303383 PRMT8Q9NR22 394 aaPredicted RBP13.57□□□□□ -0.24
SHCBP1-201ENST00000303383 PILRBQ9UKJ0 227 aa13.57□□□□□ -0.24
SHCBP1-201ENST00000303383 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.57□□□□□ -0.24
SHCBP1-201ENST00000303383 BLACEA4D250 179 aa13.57□□□□□ -0.24
SHCBP1-201ENST00000303383 PRAMEF25A6NGN4 478 aa13.57□□□□□ -0.24
SHCBP1-201ENST00000303383 CASC3O15234 703 aaKnown RBP13.57□□□□□ -0.24
SHCBP1-201ENST00000303383 B4GAT1O43505 415 aa13.57□□□□□ -0.24
SHCBP1-201ENST00000303383 H1F0P07305 194 aaKnown RBP13.57□□□□□ -0.24
SHCBP1-201ENST00000303383 ITGAMP11215 1152 aa13.57□□□□□ -0.24
SHCBP1-201ENST00000303383 POU2F1P14859 743 aa13.57□□□□□ -0.24
SHCBP1-201ENST00000303383 RPS6KA3P51812 740 aa13.57□□□□□ -0.24
SHCBP1-201ENST00000303383 GIMAP5Q96F15 307 aa13.57□□□□□ -0.24
SHCBP1-201ENST00000303383 NDC1Q9BTX1 674 aa13.57□□□□□ -0.24
SHCBP1-201ENST00000303383 PINK1Q9BXM7 581 aa13.57□□□□□ -0.24
SHCBP1-201ENST00000303383 CUTCQ9NTM9 273 aa13.57□□□□□ -0.24
SHCBP1-201ENST00000303383 NDUFA13Q9P0J0 144 aa13.57□□□□□ -0.24
SHCBP1-201ENST00000303383 SERTAD3Q9UJW9 196 aa13.57□□□□□ -0.24
SHCBP1-201ENST00000303383 HCN4Q9Y3Q4 1203 aa13.57□□□□□ -0.24
SHCBP1-201ENST00000303383 TMEM131Q92545 1883 aa13.57□□□□□ -0.24
SHCBP1-201ENST00000303383 SEC16AO15027 2179 aa13.57□□□□□ -0.24
SHCBP1-201ENST00000303383 A0A087WV62 115 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 A8MVJ9 347 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 PLOD3O60568 738 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 IL7RP16871 459 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 GSSP48637 474 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 LARS2Q15031 903 aaKnown RBP13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 NR0B2Q15466 257 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 GPR68Q15743 365 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 HLA-BQ31612 363 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 TSEN54Q7Z6J9 526 aaKnown RBP13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 SHISA5Q8N114 240 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 CARFQ8N187 725 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 OR51Q1Q8NH59 317 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 RIT1Q92963 219 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 ANKRD9Q96BM1 317 aaPredicted RBP13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 SLX1AQ9BQ83 275 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 GAREM1Q9H706 876 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 ACER3Q9NUN7 267 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 MAT2BQ9NZL9 334 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 POFUT2Q9Y2G5 429 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 PCDHGA8Q9Y5G5 932 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 RP1P56715 2156 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 AGRPO00253 132 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 PCDH17O14917 1159 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 PCDHGA12O60330 932 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 OR10H3O60404 316 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 CTNSO60931 367 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 LINGO3P0C6S8 592 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 FUT5Q11128 374 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 NPRL3Q12980 569 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 DUSP5Q16690 384 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 MEP1AQ16819 746 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 RBM45Q8IUH3 476 aaKnown RBP13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 SIMC1Q8NDZ2 872 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 OR9Q2Q8NGE9 314 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 OR52P1PQ8NH57 321 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 GTPBP3Q969Y2 492 aaKnown RBP13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 CNPPD1Q9BV87 410 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 SLC38A1Q9H2H9 487 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 NMNAT1Q9HAN9 279 aaPredicted RBP13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 ENOPH1Q9UHY7 261 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 NCOR1O75376 2440 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 SLC16A6O15403 523 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 PGDP52209 483 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 PDX1P52945 283 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 PRICKLE4Q2TBC4 344 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 FAHD1Q6P587 224 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 PIGUQ9H490 435 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 CTPS2Q9NRF8 586 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 TMEM9Q9P0T7 183 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 NTMQ9P121 344 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 CDC14AQ9UNH5 594 aa13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 ARID1BQ8NFD5 2236 aaPredicted RBP13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 TP53BP1Q12888 1972 aaPredicted RBP13.56□□□□□ -0.24
SHCBP1-201ENST00000303383 A0A1B0GTQ1 180 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 TPST2O60704 377 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 MED26O95402 600 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 PABPC4LP0CB38 370 aaKnown RBP13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 CD1CP29017 333 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 MAN2A2P49641 1150 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 BNC1Q01954 994 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 RAPSNQ13702 412 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 VRK2Q86Y07 508 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 AQP11Q8NBQ7 271 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 OR52R1Q8NGF1 315 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 ZNF675Q8TD23 568 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 CHRNA10Q9GZZ6 450 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 MTHFD2LQ9H903 347 aaPredicted RBP13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 IFT52Q9Y366 437 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 PCDH15Q96QU1 1955 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 H0YIG0 161 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 TFAP2AP05549 437 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 GABRA3P34903 492 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 RGS8P57771 180 aaPredicted RBP13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 TAS2R41P59536 307 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 ZNF267Q14586 743 aaPredicted RBP13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 MINDY4Q4G0A6 757 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 CCNJQ5T5M9 372 aa13.55□□□□□ -0.24
SHCBP1-201ENST00000303383 ZNF691Q5VV52 312 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms