RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 BDKRB1P46663 353 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 NFE2L1Q14494 772 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 LRRC73Q5JTD7 316 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 SLC35F1Q5T1Q4 408 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 FAM198BQ6UWH4 519 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 GATAD2BQ8WXI9 593 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 RAB8BQ92930 207 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 LRRC3BQ96PB8 259 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 HHIPQ96QV1 700 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 LRFN3Q9BTN0 628 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 WDR26Q9H7D7 661 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 ACOT13Q9NPJ3 140 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 KCNN3Q9UGI6 736 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 LIPT1Q9Y234 373 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 PCDHGA7Q9Y5G6 932 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 SLC35F4A4IF30 521 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 EIF1AYO14602 144 aaKnown RBP11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 SLC16A5O15375 505 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 GALR2O43603 387 aaPredicted RBP11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 MMP20O60882 483 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 TIA1P31483 386 aaKnown RBP eCLIP11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 CD70P32970 193 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 EIF1AXP47813 144 aaKnown RBP11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 DHPSP49366 369 aaPredicted RBP11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 RCAN2Q14206 197 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 UAP1L1Q3KQV9 507 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 GPRC6AQ5T6X5 926 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 GTF2IRD2BQ6EKJ0 949 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 NADSYN1Q6IA69 706 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 GTF2IRD2Q86UP8 949 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 DCUN1D3Q8IWE4 304 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 KCT2Q8NC54 265 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 OR9A1PQ8NGU1 263 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 FANK1Q8TC84 345 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 TFAP2CQ92754 450 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 RGCCQ9H4X1 137 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 TAS2R8Q9NYW2 309 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 LAMP5Q9UJQ1 280 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 ERVK-19Q9WJR5 959 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 OARD1Q9Y530 152 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 TEX13CA0A0J9YWL9 993 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 SMCO3A2RU48 225 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 SLC22A31A6NKX4 558 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 NDUFS4O43181 175 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 CRYZL1O95825 349 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 CHRNB1P11230 501 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 ELAVL3Q14576 367 aaKnown RBP11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 ZNF584Q8IVC4 421 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 FTMTQ8N4E7 242 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 FAM86B1Q8N7N1 296 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 FBXO15Q8NCQ5 510 aaPredicted RBP11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 WBP2Q969T9 261 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 PMEPA1Q969W9 287 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 TESCQ96BS2 214 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 L3HYPDHQ96EM0 354 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 TMEM41AQ96HV5 264 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 LRIG1Q96JA1 1093 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 DPEP2Q9H4A9 486 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 PCDHB16Q9NRJ7 776 aa11.25□□□□□ -0.61
SYNGAP1-201ENST00000293748 HSPA12AO43301 675 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 PAK4O96013 591 aaPredicted RBP11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 ACP5P13686 325 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 NOXA1Q86UR1 476 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 BEST3Q8N1M1 668 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 SH3YL1Q96HL8 342 aaPredicted RBP11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 LRR1Q96L50 414 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 SLC29A1Q99808 456 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 SDR39U1Q9NRG7 319 aaPredicted RBP11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 SCDO00767 359 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 LYRM1O43325 122 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 SPARCP09486 303 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 FGFBP1Q14512 234 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 CCDC58Q4VC31 144 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 UMODL1-AS1Q8N2C9 162 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 KRTCAP2Q8N6L1 136 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 ZNF565Q8N9K5 539 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 MFSD8Q8NHS3 518 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 GAB3Q8WWW8 586 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 KCNIP3Q9Y2W7 256 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 TCF20Q9UGU0 1960 aaKnown RBP11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 UPK3BL1B0FP48 263 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 UPK3BL2E5RIL1 263 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 PAHP00439 452 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 ITGA5P08648 1049 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 CLUP10909 449 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 HLA-FP30511 346 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 DCTP40126 519 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 GDI2P50395 445 aaKnown RBP11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 CLCNKAP51800 687 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 PDX1P52945 283 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 NRG3P56975 720 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 POU4F2Q12837 409 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 C22orf39Q6P5X5 142 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 KCTD18Q6PI47 426 aaPredicted RBP11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 ETFBKMTQ8IXQ9 262 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 ASB15Q8WXK1 588 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 C7orf34Q96L11 122 aa11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 CCDC86Q9H6F5 360 aaKnown RBP11.24□□□□□ -0.61
SYNGAP1-201ENST00000293748 NANSQ9NR45 359 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms