RNA–Protein interactions for RNA: ENST00000291386.3

SSU72-201, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSU72, Length 1,290 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-201ENST00000291386 TLE1Q04724 770 aa24.79■■□□□ 1.56
SSU72-201ENST00000291386 MAPKAPK3Q16644 382 aa24.79■■□□□ 1.56
SSU72-201ENST00000291386 FAM174BQ3ZCQ3 159 aa24.79■■□□□ 1.56
SSU72-201ENST00000291386 CISD2Q8N5K1 135 aaKnown RBP24.79■■□□□ 1.56
SSU72-201ENST00000291386 NUP43Q8NFH3 380 aa24.79■■□□□ 1.56
SSU72-201ENST00000291386 PAQR8Q8TEZ7 354 aa24.79■■□□□ 1.56
SSU72-201ENST00000291386 FAM120BQ96EK7 910 aaKnown RBP24.79■■□□□ 1.56
SSU72-201ENST00000291386 GIMAP5Q96F15 307 aa24.79■■□□□ 1.56
SSU72-201ENST00000291386 MAGED4Q96JG8 741 aa24.79■■□□□ 1.56
SSU72-201ENST00000291386 MARK4Q96L34 752 aa24.79■■□□□ 1.56
SSU72-201ENST00000291386 ZBTB18Q99592 522 aa24.79■■□□□ 1.56
SSU72-201ENST00000291386 CXorf36Q9H7Y0 433 aa24.79■■□□□ 1.56
SSU72-201ENST00000291386 NPHS2Q9NP85 383 aa24.79■■□□□ 1.56
SSU72-201ENST00000291386 KLHL1Q9NR64 748 aa24.79■■□□□ 1.56
SSU72-201ENST00000291386 FAM120CQ9NX05 1096 aaKnown RBP24.79■■□□□ 1.56
SSU72-201ENST00000291386 S100A3P33764 101 aa24.78■■□□□ 1.56
SSU72-201ENST00000291386 MAP3K8P41279 467 aa24.78■■□□□ 1.56
SSU72-201ENST00000291386 HBA1P69905 142 aa24.78■■□□□ 1.56
SSU72-201ENST00000291386 ZNF155Q12901 538 aaPredicted RBP24.78■■□□□ 1.56
SSU72-201ENST00000291386 ZCCHC12Q6PEW1 402 aa24.78■■□□□ 1.56
SSU72-201ENST00000291386 NPSR1Q6W5P4 371 aa24.78■■□□□ 1.56
SSU72-201ENST00000291386 SLC34A3Q8N130 599 aa24.78■■□□□ 1.56
SSU72-201ENST00000291386 MIER2Q8N344 545 aa24.78■■□□□ 1.56
SSU72-201ENST00000291386 FAM98AQ8NCA5 519 aaKnown RBP24.78■■□□□ 1.56
SSU72-201ENST00000291386 DNAJB8Q8NHS0 232 aa24.78■■□□□ 1.56
SSU72-201ENST00000291386 RFWD2Q8NHY2 731 aa24.78■■□□□ 1.56
SSU72-201ENST00000291386 SFXN5Q8TD22 340 aa24.78■■□□□ 1.56
SSU72-201ENST00000291386 MOAP1Q96BY2 351 aa24.78■■□□□ 1.56
SSU72-201ENST00000291386 MS4A4EQ96PG1 132 aa24.78■■□□□ 1.56
SSU72-201ENST00000291386 TAAR6Q96RI8 345 aa24.78■■□□□ 1.56
SSU72-201ENST00000291386 SECISBP2Q96T21 854 aaKnown RBP24.78■■□□□ 1.56
SSU72-201ENST00000291386 TRIM4Q9C037 500 aa24.78■■□□□ 1.56
SSU72-201ENST00000291386 FGFR1OP2Q9NVK5 253 aa24.78■■□□□ 1.56
SSU72-201ENST00000291386 NTNG1Q9Y2I2 539 aa24.78■■□□□ 1.56
SSU72-201ENST00000291386 SPENQ96T58 3664 aaKnown RBP24.77■■□□□ 1.56
SSU72-201ENST00000291386 KLRC4-KLRK1H3BQV0 150 aa24.77■■□□□ 1.56
SSU72-201ENST00000291386 NME6O75414 186 aaPredicted RBP24.77■■□□□ 1.56
SSU72-201ENST00000291386 PPM1BO75688 479 aa24.77■■□□□ 1.56
SSU72-201ENST00000291386 IL6P05231 212 aa24.77■■□□□ 1.56
SSU72-201ENST00000291386 PGRP06401 933 aa24.77■■□□□ 1.56
SSU72-201ENST00000291386 ZFP36L2P47974 494 aaKnown RBP24.77■■□□□ 1.56
SSU72-201ENST00000291386 CORO7P57737 925 aa24.77■■□□□ 1.56
SSU72-201ENST00000291386 LRRC74AQ0VAA2 488 aa24.77■■□□□ 1.56
SSU72-201ENST00000291386 NNATQ16517 81 aa24.77■■□□□ 1.56
SSU72-201ENST00000291386 PRR30Q53SZ7 412 aaPredicted RBP24.77■■□□□ 1.56
SSU72-201ENST00000291386 EXOSC6Q5RKV6 272 aaKnown RBP24.77■■□□□ 1.56
SSU72-201ENST00000291386 CDRT4Q8N9R6 151 aa24.77■■□□□ 1.56
SSU72-201ENST00000291386 SACM1LQ9NTJ5 587 aa24.77■■□□□ 1.56
SSU72-201ENST00000291386 ZCCHC3Q9NUD5 404 aaKnown RBP24.77■■□□□ 1.56
SSU72-201ENST00000291386 TMEM45AQ9NWC5 275 aa24.77■■□□□ 1.56
SSU72-201ENST00000291386 BTNL2Q9UIR0 455 aa24.77■■□□□ 1.56
SSU72-201ENST00000291386 CHCHD2Q9Y6H1 151 aaPredicted RBP24.77■■□□□ 1.56
SSU72-201ENST00000291386 SHANK1Q9Y566 2161 aa24.76■■□□□ 1.55
SSU72-201ENST00000291386 TP53I11O14683 189 aa24.76■■□□□ 1.55
SSU72-201ENST00000291386 CFLARO15519 480 aa24.76■■□□□ 1.55
SSU72-201ENST00000291386 ABCB1P08183 1280 aaPredicted RBP24.76■■□□□ 1.55
SSU72-201ENST00000291386 VIMP08670 466 aaKnown RBP24.76■■□□□ 1.55
SSU72-201ENST00000291386 TROVE2P10155 538 aaKnown RBP eCLIP24.76■■□□□ 1.55
SSU72-201ENST00000291386 CCT3P49368 545 aaKnown RBP24.76■■□□□ 1.55
SSU72-201ENST00000291386 ATP4BP51164 291 aa24.76■■□□□ 1.55
SSU72-201ENST00000291386 ZNHIT3Q15649 155 aaPredicted RBP24.76■■□□□ 1.55
SSU72-201ENST00000291386 SLC22A10Q63ZE4 541 aa24.76■■□□□ 1.55
SSU72-201ENST00000291386 SULF2Q8IWU5 870 aa24.76■■□□□ 1.55
SSU72-201ENST00000291386 CLECL1Q8IZS7 167 aa24.76■■□□□ 1.55
SSU72-201ENST00000291386 BCORP1Q8N888 145 aa24.76■■□□□ 1.55
SSU72-201ENST00000291386 OR56A1Q8NGH5 318 aa24.76■■□□□ 1.55
SSU72-201ENST00000291386 GRHL3Q8TE85 626 aa24.76■■□□□ 1.55
SSU72-201ENST00000291386 MIB2Q96AX9 1013 aa24.76■■□□□ 1.55
SSU72-201ENST00000291386 OMA1Q96E52 524 aa24.76■■□□□ 1.55
SSU72-201ENST00000291386 THOC1Q96FV9 657 aaKnown RBP24.76■■□□□ 1.55
SSU72-201ENST00000291386 ZNF317Q96PQ6 595 aaPredicted RBP24.76■■□□□ 1.55
SSU72-201ENST00000291386 AGPAT4Q9NRZ5 378 aa24.76■■□□□ 1.55
SSU72-201ENST00000291386 ASF1BQ9NVP2 202 aa24.76■■□□□ 1.55
SSU72-201ENST00000291386 CNIH4Q9P003 139 aa24.76■■□□□ 1.55
SSU72-201ENST00000291386 DCTN4Q9UJW0 460 aa24.76■■□□□ 1.55
SSU72-201ENST00000291386 PCDHGB4Q9UN71 923 aa24.76■■□□□ 1.55
SSU72-201ENST00000291386 EML6Q6ZMW3 1958 aa24.76■■□□□ 1.55
SSU72-201ENST00000291386 PEX1O43933 1283 aa24.75■■□□□ 1.55
SSU72-201ENST00000291386 CRYABP02511 175 aaKnown RBP24.75■■□□□ 1.55
SSU72-201ENST00000291386 CNR1P21554 472 aa24.75■■□□□ 1.55
SSU72-201ENST00000291386 PRKAG1P54619 331 aa24.75■■□□□ 1.55
SSU72-201ENST00000291386 STX1BP61266 288 aa24.75■■□□□ 1.55
SSU72-201ENST00000291386 PLCXD2Q0VAA5 305 aa24.75■■□□□ 1.55
SSU72-201ENST00000291386 CYP27C1Q4G0S4 372 aa24.75■■□□□ 1.55
SSU72-201ENST00000291386 ZNF324BQ6AW86 544 aaPredicted RBP24.75■■□□□ 1.55
SSU72-201ENST00000291386 CGB2Q6NT52 195 aa24.75■■□□□ 1.55
SSU72-201ENST00000291386 MFSD12Q6NUT3 480 aa24.75■■□□□ 1.55
SSU72-201ENST00000291386 PAOXQ6QHF9 649 aa24.75■■□□□ 1.55
SSU72-201ENST00000291386 FAM180AQ6UWF9 173 aa24.75■■□□□ 1.55
SSU72-201ENST00000291386 NUP54Q7Z3B4 507 aa24.75■■□□□ 1.55
SSU72-201ENST00000291386 SLC44A2Q8IWA5 706 aaPredicted RBP24.75■■□□□ 1.55
SSU72-201ENST00000291386 PRR22Q8IZ63 422 aa24.75■■□□□ 1.55
SSU72-201ENST00000291386 FBXW8Q8N3Y1 598 aa24.75■■□□□ 1.55
SSU72-201ENST00000291386 POGLUT1Q8NBL1 392 aa24.75■■□□□ 1.55
SSU72-201ENST00000291386 OR10G3Q8NGC4 313 aa24.75■■□□□ 1.55
SSU72-201ENST00000291386 GOT1L1Q8NHS2 421 aaPredicted RBP24.75■■□□□ 1.55
SSU72-201ENST00000291386 FAR1Q8WVX9 515 aa24.75■■□□□ 1.55
SSU72-201ENST00000291386 SLC35A4Q96G79 324 aa24.75■■□□□ 1.55
SSU72-201ENST00000291386 CCDC115Q96NT0 180 aa24.75■■□□□ 1.55
SSU72-201ENST00000291386 SNX8Q9Y5X2 465 aa24.75■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms