RNA–Protein interactions for RNA: ENST00000281834.3

TNFSF4-201, Transcript of TNF superfamily member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF4, Length 3,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-201ENST00000281834 TNFP01375 233 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 ALPPP05187 535 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 ALOX12P18054 663 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 FUT1P19526 365 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 ITIH1P19827 911 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 SOX3P41225 446 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 GABARAPL2P60520 117 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 MXD1Q05195 221 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 FUT5Q11128 374 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 GINS1Q14691 196 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 SUZ12Q15022 739 aaKnown RBP5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 CTF1Q16619 201 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 ARMCX4Q5H9R4 360 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 BHLHB9Q6PI77 547 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 UTS2BQ765I0 119 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 PAQR7Q86WK9 346 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 GALNT12Q8IXK2 581 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 WDFY3Q8IZQ1 3526 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 DEPDC4Q8N2C3 294 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 LRRC25Q8N386 305 aaPredicted RBP5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 DNAJC22Q8N4W6 341 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 MFSD9Q8NBP5 474 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 TMEM52Q8NDY8 209 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 TSTD1Q8NFU3 115 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 OR4K14Q8NGD5 310 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 RHOXF1Q8NHV9 184 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 ZNF675Q8TD23 568 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 LGALS12Q96DT0 336 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 ART5Q96L15 291 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 Q96MT0 163 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 GPA33Q99795 319 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 ZFYVE21Q9BQ24 234 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 FOXQ1Q9C009 403 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 PLGRKTQ9HBL7 147 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 FAM60AQ9NP50 221 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 ACSS1Q9NUB1 689 aaPredicted RBP5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 ENPP5Q9UJA9 477 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 CARD8Q9Y2G2 431 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 WDR45Q9Y484 360 aa5.68□□□□□ -1.5
TNFSF4-201ENST00000281834 RGS5O15539 181 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 LRRTM2O43300 516 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 EMC8O43402 210 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 FGF17O60258 216 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 ST6GAL1P15907 406 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 MMP11P24347 488 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 AHRP35869 848 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 SEPHS1P49903 392 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 SLC13A2Q13183 592 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 ZIC1Q15915 447 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 CARTPTQ16568 116 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 TSTQ16762 297 aaKnown RBP5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 DEFB133Q30KQ1 61 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 AMZ1Q400G9 498 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 SLC35F1Q5T1Q4 408 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 ZNF425Q6IV72 752 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 SLC30A6Q6NXT4 461 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 PRSS48Q7RTY5 328 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 ZER1Q7Z7L7 766 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 CSNK1A1LQ8N752 337 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 LMX1AQ8TE12 382 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 GRHL3Q8TE85 626 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 MYDGFQ969H8 173 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 FKBP10Q96AY3 582 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 SLC22A18Q96BI1 424 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 TUBA1CQ9BQE3 449 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 CNPPD1Q9BV87 410 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 A4GALTQ9NPC4 353 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 THSD1Q9NS62 852 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 TOR4AQ9NXH8 423 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 MAT2BQ9NZL9 334 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 NDOR1Q9UHB4 597 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 MAU2Q9Y6X3 613 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 TICRRQ7Z2Z1 1910 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 SLC9B1P1A6NJY1 282 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 FAM170BA6NMN3 283 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 PRICKLE3O43900 615 aaPredicted RBP5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 HNRNPCP07910 306 aaKnown RBP eCLIP5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 HOXB6P17509 224 aaKnown RBP5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 CBLP22681 906 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 NDUFS1P28331 727 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 SERPINB1P30740 379 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 RXRGP48443 463 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 SERPINB10P48595 397 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 EMP3P54852 163 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 RPS15AP62244 130 aaKnown RBP5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 DUSP5Q16690 384 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 PGBD2Q6P3X8 592 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 HSDL2Q6YN16 418 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 TMEM184AQ6ZMB5 413 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 NKAIN4Q8IVV8 208 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 TDHQ8IZJ6 230 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 COX18Q8N8Q8 333 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 ZFP41Q8N8Y5 198 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 OR52P1PQ8NH57 321 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 PSMA8Q8TAA3 256 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 POP5Q969H6 163 aaKnown RBP5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 SLC35A4Q96G79 324 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 PEX11GQ96HA9 241 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 PLEKHA8Q96JA3 519 aa5.67□□□□□ -1.5
TNFSF4-201ENST00000281834 LRR1Q96L50 414 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms