RNA–Protein interactions for RNA: ENST00000272322.8

VPS54-201, Transcript of VPS54, GARP complex subunit, humanhuman

APPRIS P3 TSL 5 BASIC

Gene VPS54, Length 3,463 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS54-201ENST00000272322 A6NIN4 97 aa15.64■□□□□ 0.09
VPS54-201ENST00000272322 A6NL46 340 aa15.64■□□□□ 0.09
VPS54-201ENST00000272322 FAM170BA6NMN3 283 aa15.64■□□□□ 0.09
VPS54-201ENST00000272322 PIP5K1CO60331 668 aa15.64■□□□□ 0.09
VPS54-201ENST00000272322 NCR1O76036 304 aa15.64■□□□□ 0.09
VPS54-201ENST00000272322 TRHRP34981 398 aaPredicted RBP15.64■□□□□ 0.09
VPS54-201ENST00000272322 TGM3Q08188 693 aa15.64■□□□□ 0.09
VPS54-201ENST00000272322 FUT5Q11128 374 aa15.64■□□□□ 0.09
VPS54-201ENST00000272322 E2F2Q14209 437 aa15.64■□□□□ 0.09
VPS54-201ENST00000272322 CCDC80Q76M96 950 aa15.64■□□□□ 0.09
VPS54-201ENST00000272322 TMEM80Q96HE8 168 aa15.64■□□□□ 0.09
VPS54-201ENST00000272322 GNSP15586 552 aa15.64■□□□□ 0.09
VPS54-201ENST00000272322 SDHBP21912 280 aa15.64■□□□□ 0.09
VPS54-201ENST00000272322 ATP5A1P25705 553 aaKnown RBP15.64■□□□□ 0.09
VPS54-201ENST00000272322 EIF4HQ15056 248 aaKnown RBP15.64■□□□□ 0.09
VPS54-201ENST00000272322 PRSS41Q7RTY9 318 aa15.64■□□□□ 0.09
VPS54-201ENST00000272322 SLC7A5P1Q8MH63 180 aa15.64■□□□□ 0.09
VPS54-201ENST00000272322 OR2L3Q8NG85 312 aa15.64■□□□□ 0.09
VPS54-201ENST00000272322 TMED9Q9BVK6 235 aa15.64■□□□□ 0.09
VPS54-201ENST00000272322 FAIM2Q9BWQ8 316 aa15.64■□□□□ 0.09
VPS54-201ENST00000272322 BARHL1Q9BZE3 327 aa15.64■□□□□ 0.09
VPS54-201ENST00000272322 TMEM168Q9H0V1 697 aa15.64■□□□□ 0.09
VPS54-201ENST00000272322 MED20Q9H944 212 aa15.64■□□□□ 0.09
VPS54-201ENST00000272322 B3GNT3Q9Y2A9 372 aa15.64■□□□□ 0.09
VPS54-201ENST00000272322 MAN2B1O00754 1011 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 RNGTTO60942 597 aaKnown RBP15.63■□□□□ 0.09
VPS54-201ENST00000272322 APODP05090 189 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 TSPAN19P0C672 248 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 ZNF888P0CJ79 500 aaPredicted RBP15.63■□□□□ 0.09
VPS54-201ENST00000272322 HMGA2P52926 109 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 STXBP1P61764 594 aaKnown RBP15.63■□□□□ 0.09
VPS54-201ENST00000272322 ZNF791Q3KP31 576 aaPredicted RBP15.63■□□□□ 0.09
VPS54-201ENST00000272322 CRTC2Q53ET0 693 aaPredicted RBP15.63■□□□□ 0.09
VPS54-201ENST00000272322 ADAMTSL4Q6UY14 1074 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 GALNT12Q8IXK2 581 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 ADAMTS15Q8TE58 950 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 MYADMQ96S97 322 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 PLCXD1Q9NUJ7 323 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 LRRC72A6NJI9 287 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 CDC123O75794 336 aaPredicted RBP15.63■□□□□ 0.09
VPS54-201ENST00000272322 ADAP00813 363 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 RGS8P57771 180 aaPredicted RBP15.63■□□□□ 0.09
VPS54-201ENST00000272322 ABHD17CQ6PCB6 329 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 ZNF765Q7L2R6 523 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 ABI3BPQ7Z7G0 1075 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 ATCAYQ86WG3 371 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 BBS1Q8NFJ9 593 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 SUN3Q8TAQ9 357 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 SEMA4GQ9NTN9 838 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 COMMD3Q9UBI1 195 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 PDE9AO76083 593 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 CCNYL3P0C7X3 344 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 PEBP1P30086 187 aaKnown RBP15.63■□□□□ 0.09
VPS54-201ENST00000272322 IGFALSP35858 605 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 PDX1P52945 283 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 HNRNPA0Q13151 305 aaKnown RBP15.63■□□□□ 0.09
VPS54-201ENST00000272322 FAM111BQ6SJ93 734 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 OR5T3Q8NGG3 340 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 DNAJA3Q96EY1 480 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 TRNT1Q96Q11 434 aaKnown RBP15.63■□□□□ 0.09
VPS54-201ENST00000272322 FBXO34Q9NWN3 711 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 PCDHGA3Q9Y5H0 932 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 WDFY3Q8IZQ1 3526 aa15.63■□□□□ 0.09
VPS54-201ENST00000272322 PLXNA2O75051 1894 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 DVL2O14641 736 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 PCYT1AP49585 367 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 CSTF1Q05048 431 aaKnown RBP15.62■□□□□ 0.09
VPS54-201ENST00000272322 NNATQ16517 81 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 RPE65Q16518 533 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 DEFB110Q30KQ9 67 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 SYT14P1Q58G82 188 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 FIGNL1Q6PIW4 674 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 GDPD3Q7L5L3 318 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 NRMQ8IXM6 262 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 APOBEC4Q8WW27 367 aaKnown RBP15.62■□□□□ 0.09
VPS54-201ENST00000272322 CAPSLQ8WWF8 208 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 CDS1Q92903 461 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 OR7D2Q96RA2 312 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 A4GALTQ9NPC4 353 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 PRDM7Q9NQW5 492 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 MAN2C1Q9NTJ4 1040 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 CLCA2Q9UQC9 943 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 A0A0A6YYD5 115 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 C2orf92A0A1B0GVN3 265 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 CSNK2A2P19784 350 aaPredicted RBP15.62■□□□□ 0.09
VPS54-201ENST00000272322 SDC2P34741 201 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 TUBA1BP68363 451 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 ILKQ13418 452 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 TUBA1AQ71U36 451 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 KIF18BQ86Y91 864 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 SLC30A8Q8IWU4 369 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 OR8D4Q8NGM9 314 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 OR8J1Q8NGP2 316 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 PIK3R3Q92569 461 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 SAP130Q9H0E3 1048 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 DDX31Q9H8H2 851 aaKnown RBP15.62■□□□□ 0.09
VPS54-201ENST00000272322 WASH6PQ9NQA3 447 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 MGAT4BQ9UQ53 548 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 TSC22D4Q9Y3Q8 395 aa15.62■□□□□ 0.09
VPS54-201ENST00000272322 ZNF780BQ9Y6R6 833 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms