RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 SEC14L2O76054 403 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 SLITRK5O94991 958 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 OXSR1O95747 527 aaPredicted RBP15.55■□□□□ 0.08
CCDC40-201ENST00000269318 ALPPP05187 535 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 ACP2P11117 423 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 PCMT1P22061 227 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 DCKP27707 260 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 PCSK6P29122 969 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 DMWDQ09019 674 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 DUSP5Q16690 384 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 PRICKLE4Q2TBC4 344 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 ZNF311Q5JNZ3 666 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 FGD3Q5JSP0 725 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 DCST1Q5T197 706 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 KLHL17Q6TDP4 642 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 FRRS1Q6ZNA5 592 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 ZNF675Q8TD23 568 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 DUSP15Q9H1R2 295 aaPredicted RBP15.55■□□□□ 0.08
CCDC40-201ENST00000269318 VCX3AQ9NNX9 186 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 RASSF1Q9NS23 344 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 TMCC3Q9ULS5 477 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 A0A1W2PRQ8 180 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 CHST10O43529 356 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 FOXS1O43638 330 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 ADAP00813 363 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 KRT20P35900 424 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 GFERP55789 205 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 SMIM11AP58511 58 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 FOXD4Q12950 439 aaPredicted RBP15.55■□□□□ 0.08
CCDC40-201ENST00000269318 DGCR6Q14129 220 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 ARHGAP11BQ3KRB8 267 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 MLIPQ5VWP3 458 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 VRK2Q86Y07 508 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 UBALD2Q8IYN6 164 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 SLC7A13Q8TCU3 470 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 SLC9A6Q92581 669 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 CTHRC1Q96CG8 243 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 ARHGDIGQ99819 225 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 MAN2C1Q9NTJ4 1040 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 MAT2BQ9NZL9 334 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 FTSJ1Q9UET6 329 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 TPRKBQ9Y3C4 175 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 SIT1Q9Y3P8 196 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 PCDHGB1Q9Y5G3 927 aa15.55■□□□□ 0.08
CCDC40-201ENST00000269318 A0A0A6YYC8 382 aaPredicted RBP15.54■□□□□ 0.08
CCDC40-201ENST00000269318 C19orf67A6NJJ6 358 aa15.54■□□□□ 0.08
CCDC40-201ENST00000269318 I3L1I5 382 aaPredicted RBP15.54■□□□□ 0.08
CCDC40-201ENST00000269318 UGT2B17O75795 530 aa15.54■□□□□ 0.08
CCDC40-201ENST00000269318 NT5EP21589 574 aa15.54■□□□□ 0.08
CCDC40-201ENST00000269318 GSSP48637 474 aa15.54■□□□□ 0.08
CCDC40-201ENST00000269318 RHOXF1Q8NHV9 184 aa15.54■□□□□ 0.08
CCDC40-201ENST00000269318 ZNF420Q8TAQ5 688 aaPredicted RBP15.54■□□□□ 0.08
CCDC40-201ENST00000269318 DOK4Q8TEW6 326 aa15.54■□□□□ 0.08
CCDC40-201ENST00000269318 ZFAND2BQ8WV99 257 aa15.54■□□□□ 0.08
CCDC40-201ENST00000269318 PRRC1Q96M27 445 aa15.54■□□□□ 0.08
CCDC40-201ENST00000269318 DOK1Q99704 481 aa15.54■□□□□ 0.08
CCDC40-201ENST00000269318 CHRNA10Q9GZZ6 450 aa15.54■□□□□ 0.08
CCDC40-201ENST00000269318 RAB33BQ9H082 229 aa15.54■□□□□ 0.08
CCDC40-201ENST00000269318 PIGUQ9H490 435 aa15.54■□□□□ 0.08
CCDC40-201ENST00000269318 ERVK-18Q9QC07 812 aa15.54■□□□□ 0.08
CCDC40-201ENST00000269318 EPHA6Q9UF33 1036 aa15.54■□□□□ 0.08
CCDC40-201ENST00000269318 ENOPH1Q9UHY7 261 aa15.54■□□□□ 0.08
CCDC40-201ENST00000269318 CLCA2Q9UQC9 943 aa15.54■□□□□ 0.08
CCDC40-201ENST00000269318 NINQ8N4C6 2090 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 IGHV5-51A0A0C4DH38 117 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 SH3PXD2BA1X283 911 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 TLCD2A6NGC4 264 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 BCAT2O15382 392 aaPredicted RBP15.53■□□□□ 0.08
CCDC40-201ENST00000269318 CT62P0C5K7 136 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 GABRB1P18505 474 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 ITIH1P19827 911 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 PRKAR1BP31321 381 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 AFF3P51826 1226 aaKnown RBP15.53■□□□□ 0.08
CCDC40-201ENST00000269318 EPHA4P54764 986 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 TUBA3CQ13748 450 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 TYW3Q6IPR3 259 aaKnown RBP15.53■□□□□ 0.08
CCDC40-201ENST00000269318 PGBD2Q6P3X8 592 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 DHRS4L2Q6PKH6 230 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 FAM81AQ8TBF8 368 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 MUL1Q969V5 352 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 MPP4Q96JB8 637 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 TGM7Q96PF1 710 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 RHNO1Q9BSD3 238 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 LHPPQ9H008 270 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 SCN3BQ9NY72 215 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 REV1Q9UBZ9 1251 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 MGAT4BQ9UQ53 548 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 GPR55Q9Y2T6 319 aaPredicted RBP15.53■□□□□ 0.08
CCDC40-201ENST00000269318 SNX5Q9Y5X3 404 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 ZAR1LA6NP61 321 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 SLC35E2P0CK97 266 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 CHMP24386 653 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 MAP3K8P41279 467 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 C21orf59P57076 290 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 HPCAP84074 193 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 FAM53BQ14153 422 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 PTGES3Q15185 160 aaKnown RBP15.53■□□□□ 0.08
CCDC40-201ENST00000269318 GPR107Q5VW38 600 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 CCDC103Q8IW40 242 aa15.53■□□□□ 0.08
CCDC40-201ENST00000269318 OR52P1PQ8NH57 321 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms