RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 ADAM15Q13444 863 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 DUSP6Q16828 381 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 MCATQ8IVS2 390 aaKnown RBP14.6□□□□□ -0.07
TIMP3-201ENST00000266085 TMEM151BQ8IW70 566 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 METTL25Q8N6Q8 603 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 OR2L3Q8NG85 312 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 SLC6A16Q9GZN6 736 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 HHATLQ9HCP6 504 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 DCAF13Q9NV06 445 aaKnown RBP14.6□□□□□ -0.07
TIMP3-201ENST00000266085 EURLQ9NYK6 297 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 TAAR2Q9P1P5 351 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 ARAP2Q8WZ64 1704 aa14.6□□□□□ -0.07
TIMP3-201ENST00000266085 SLC35F4A4IF30 521 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 SPARCP09486 303 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 IMPA1P29218 277 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 PCGF2P35227 344 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 OR2B6P58173 313 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 MFSD2AQ8NA29 543 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 OR9A2Q8NGT5 310 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 NEIL3Q8TAT5 605 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 RHBDD1Q8TEB9 315 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 FKBP10Q96AY3 582 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 TESCQ96BS2 214 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.59□□□□□ -0.073e-7■□□□□ 8.2
TIMP3-201ENST00000266085 MBD2Q9UBB5 411 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 PCDHGB6Q9Y5F9 930 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 UBR3Q6ZT12 1888 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 SGK494L7N484 410 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 S1PR1P21453 382 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 NAA10P41227 235 aaPredicted RBP14.59□□□□□ -0.07
TIMP3-201ENST00000266085 ARHGDIBP52566 201 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 TAP2Q03519 686 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 ALG1LQ6GMV1 187 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 RASSF6Q6ZTQ3 369 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 ADGRG5Q8IZF4 528 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 SLC44A3Q8N4M1 653 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 SLC22A8Q8TCC7 542 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 DNAJA4Q8WW22 397 aaPredicted RBP14.59□□□□□ -0.07
TIMP3-201ENST00000266085 SRA1Q9HD15 236 aaKnown RBP14.59□□□□□ -0.07
TIMP3-201ENST00000266085 INTS6Q9UL03 887 aaKnown RBP14.59□□□□□ -0.07
TIMP3-201ENST00000266085 MICAL3Q7RTP6 2002 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 ZNF208O43345 1280 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 HIST1H1TP22492 207 aaPredicted RBP14.59□□□□□ -0.07
TIMP3-201ENST00000266085 SOX2P48431 317 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 CSNK1EP49674 416 aaKnown RBP14.59□□□□□ -0.07
TIMP3-201ENST00000266085 YPEL5P62699 121 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 PIN1Q13526 163 aaPredicted RBP14.59□□□□□ -0.07
TIMP3-201ENST00000266085 GTF2IRD2BQ6EKJ0 949 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 ARHGAP11AQ6P4F7 1023 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 GTF2IRD2Q86UP8 949 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 SNX29P2Q8IUI4 249 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 NRMQ8IXM6 262 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 VWA5B2Q8N398 1253 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 OR6C4Q8NGE1 309 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 CREB3L4Q8TEY5 395 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 ZNF300Q96RE9 604 aaPredicted RBP14.59□□□□□ -0.07
TIMP3-201ENST00000266085 MROQ9BYG7 248 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 BCORQ6W2J9 1755 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 A0A0X1KG70 313 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 ALDOCP09972 364 aaKnown RBP14.59□□□□□ -0.07
TIMP3-201ENST00000266085 TMEM17Q86X19 198 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 LILRA3Q8N6C8 439 aaPredicted RBP14.59□□□□□ -0.07
TIMP3-201ENST00000266085 OR5K2Q8NHB8 316 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 LGALS12Q96DT0 336 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 CLCC1Q96S66 551 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 ZNF559Q9BR84 538 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 HOXD1Q9GZZ0 328 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 SLC6A17Q9H1V8 727 aa14.59□□□□□ -0.07
TIMP3-201ENST00000266085 MITFO75030 526 aaPredicted RBP14.58□□□□□ -0.07
TIMP3-201ENST00000266085 JRKO75564 520 aa14.58□□□□□ -0.07
TIMP3-201ENST00000266085 FARS2O95363 451 aaKnown RBP14.58□□□□□ -0.07
TIMP3-201ENST00000266085 ITGA5P08648 1049 aa14.58□□□□□ -0.07
TIMP3-201ENST00000266085 MYF6P23409 242 aa14.58□□□□□ -0.07
TIMP3-201ENST00000266085 C9orf50Q5SZB4 431 aa14.58□□□□□ -0.07
TIMP3-201ENST00000266085 KIAA0895LQ68EN5 471 aa14.58□□□□□ -0.07
TIMP3-201ENST00000266085 TMPRSS9Q7Z410 1059 aa14.58□□□□□ -0.07
TIMP3-201ENST00000266085 TDHQ8IZJ6 230 aa14.58□□□□□ -0.07
TIMP3-201ENST00000266085 ARMC10Q8N2F6 343 aa14.58□□□□□ -0.07
TIMP3-201ENST00000266085 GTF2H4Q92759 462 aa14.58□□□□□ -0.07
TIMP3-201ENST00000266085 LRIT1Q9P2V4 623 aa14.58□□□□□ -0.07
TIMP3-201ENST00000266085 PAPPA2Q9BXP8 1791 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 CDC40O60508 579 aaKnown RBP eCLIP14.58□□□□□ -0.08
TIMP3-201ENST00000266085 GAS6Q14393 721 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 RPS26P11Q5JNZ5 115 aaPredicted RBP14.58□□□□□ -0.08
TIMP3-201ENST00000266085 FAM69BQ5VUD6 431 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 SBSNQ6UWP8 590 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 ZNF227Q86WZ6 799 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 FRS2Q8WU20 508 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 BIRC8Q96P09 236 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 SLC29A1Q99808 456 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 CLMPQ9H6B4 373 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 RIMS3Q9UJD0 308 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 M0R3H8 397 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 IGLV3-27P01718 113 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 HBQ1P09105 142 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 CNR2P34972 360 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 KCNJ5P48544 419 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 HNRNPA0Q13151 305 aaKnown RBP14.58□□□□□ -0.08
TIMP3-201ENST00000266085 UBE2Q1Q7Z7E8 422 aa14.58□□□□□ -0.08
TIMP3-201ENST00000266085 TOR1AIP2Q8NFQ8 470 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms